Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0833 ATGGCGATCGCAGTTCCCAGTCGGCAGCTGTTCATTGATGGCGAGTGGAGAGAGCCGATCCTCAGGAAACGAATTCCAATTATCAATCCTTCCACTGAACTCAAAATTGGCGACATTCCAGCTGCTACTGCGGAAGATGTGGAGCTTGCAGTAGCTGCTGCACGGAGAGCCCTGGTTCGGAACAAGGGAAAAAATTGGGCAACAGCTCCTGGGTCTGTTCGTGCTCGGCATTTGCGAGCCATCGCTGCCAAGATAACAGAGAGAAAGTCTGAACTAGCAAAACTCGAAGCAATTGATTGTGGAAAACCACTGGATGAAGCATCATGGGACATGGACGATGTTGCTGGTTGCTTTGAGTACTATGCTGACCTTGCTGAAGGATTGGATGCAAAACAAAAGGCTCCCATATCTCTTCCCATGCATACCTTCAAGAGTCATGTTCTTAAGGAGCCCATTGGAGTTGTTGCATTAATTACTCCATGGAACTATCCTCTATTAATGGCTGTGTGGAAAATTGCTCCTGCTTTGGCTGCTGGTTGTACTGCAATATTGAAGCCATCTGAATTGGCATCTGTAACCTGTTTGGAGCTGGGTCAAGTATGTAGAGAAGTGGGCCTTCCTCCAGGTGTCTTAAATATTCTTACTGGATTAGGCCCTGAAGCTGGCGCTCCTTTGGCATCGCATCCTCATGTAGACAAGATTGCCTTTACTGGAAGCTCTGTGACTGGGAGCAAGATTATGACAGCTGCAGCTCAACTGGTCAAGCCTGTTTCACTAGAGCTTGGTGGGAAAAGCCCAATTGTTGTTTTTGAGGATGTTGACCTTGATAAAGCTGCTGAATGGACCATCTTTGGCTGCTTCTGGACAAATGGTCAGATTTGCAGTGCAACATCCCGTCTTATTGTACATGAGAGGATAGCTGGAGAATTTTTGAATAGGCTTGTGAAATGGATCAAAAACATCAAAATATCTGATCCCTTGGAAGAAGGTTGTAGGCTAGGTCCAGTTGTTGGTGAAGGACAGTATGAAAAAGTATTGAAGTTCATCTCAACTGCTAGAAATGAGGGTGCAACAATTTTGACCGGTGGATCTCGCCCGAAGCACTTGAAGAAGGGGTTTTTCGTTGAACCAACCGTTATAACTGATGTAACCACCACTATGCAAATATGGAGAGAAGAAGTTTTTGGACCTGTTCTGTGTGTAAAAACATTTAGTACTGAGGAAGAAGCTATTGAGCTAGCAAATGACACCCAATATGGCTTAGCTGCTGCCGTTATTTCAAATGATCTGGAAAGATGTGAGCGCATAACCAAGGCTTTCCAGGCCGGAATTGTATGGATCAATTGCTCTCAACCATGCTTCACTCAAGCCCCATGGGGAGGCACTAAACGTAGTGGTTTTGGTCGTGAATTAGGAGAATGGGGGCTTGATAACTACTTGAGTGTGAAGCAAGTCACTCAGTATATATCTGATGAACCGTGGGGCTGGTACCAGTAGGATCCACATGCTATGGATTCAAAGACACGAAATGGTTGTCGAGAGTCTTATGACTGGACTCTCGCCCTCGAGCTTGCAAAAAAGCTGAGCCTTCTCTCGGATAGTTGCGGATCATTTGGGGCTTGA 1623 0.4584 MAIAVPSRQLFIDGEWREPILRKRIPIINPSTELKIGDIPAATAEDVELAVAAARRALVRNKGKNWATAPGSVRARHLRAIAAKITERKSELAKLEAIDCGKPLDEASWDMDDVAGCFEYYADLAEGLDAKQKAPISLPMHTFKSHVLKEPIGVVALITPWNYPLLMAVWKIAPALAAGCTAILKPSELASVTCLELGQVCREVGLPPGVLNILTGLGPEAGAPLASHPHVDKIAFTGSSVTGSKIMTAAAQLVKPVSLELGGKSPIVVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHERIAGEFLNRLVKWIKNIKISDPLEEGCRLGPVVGEGQYEKVLKFISTARNEGATILTGGSRPKHLKKGFFVEPTVITDVTTTMQIWREEVFGPVLCVKTFSTEEEAIELANDTQYGLAAAVISNDLERCERITKAFQAGIVWINCSQPCFTQAPWGGTKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQXDPHAMDSKTRNGCRESYDWTLALELAKKLSLLSDSCGSFGA 540
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0833 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Dere03g0833 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Dere03g0833 540 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Dere03g0833 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Dere03g0833 540 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 277 - -
Dere03g0833 540 CDD ALDH_F10_BADH 27 487 - -
Dere03g0833 540 SUPERFAMILY ALDH-like 5 490 IPR016161 GO:0016491
Dere03g0833 540 PANTHER ALDEHYDE DEHYDROGENASE 4 501 - -
Dere03g0833 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Dere03g0833 540 Pfam Aldehyde dehydrogenase family 21 485 IPR015590 GO:0016491
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere03g0833 Dere-ChrDere03 12899416 12922057 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0833 1 498 Aldehyde Dehydrogenase Gene Family AT3G48170 81.526 0.0 877
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0833 03 12899416 12922057 Dere03g0833 03 12899416 12922057 ECH