Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0814 ATGCATGGGCGCGGAGGTGAGGAGAGGAAAAGAACTCGGCACATGTGGACAACCCCCACGCGTGGCCACCTGATTGTAAGCGCTGCTCCTGATGTTTCTTCTTCTTCGTCCTCGTCTTCAGCTACTTCGTTCTGTAAGGACGGTCGCAAAATTAGTGTTGGTGATTGTGCTCTCTTCAAGCCAGCCCAAAAGTGCCCACCTTTTGTTGGAATAATTCGTTCACTGACAGGTTGTAAAGAGGGTAAACTGAAAGTAGTTGTTAATTGGCTTTATCGATCTGCAGAAGTGAACCTTGGTGAAGGTCTCCTATTGGAGACTGCACCAAACGAAATTTTCTACTCCTTTCATAAGGATGAGATACCTGCTGCATCACTGCTTCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTGTTGAACTTCCATCAGGGATTTCGTCATTTGTGTGTAGGAGGGTTTATGACATTGCGAACAAGTGTTTATGGTGGTTAACCGACCAAGATTACATTAATGAATGTCAAGAAGAAGTAGATCAGCTATTATACAAAACTCGTATAGAAATGCATGCAACAGTGCAACCAGGTGGTCGATCTCCTAAGCCAATGAGTAGTCCAACATCATCACAGTTAAAATCAGGTTCAGATAGTGTTCAGAACAGTGCTTCTTTTCCTTCTCAAGTTAAGGGTATGAAAAGGGAAAGGGTAGATCAAGGGTCTGAGCCTGTGAAGCGAGAACGTGTGACAAAAATTGAGGATGGAGACTCTGGTCATTCTAGACAGGAAAGCATTTTAAAGGCAGAGATTGCCAAAATTACAGAAAAGGGAGGGCTTGTTAATACTGAAGGAGTTGAGAAACTGGTGCAGCTCATGATTCCTGCTAGGAATGTGAAAAAGATAGATTTGGCTAGCCGGTCAATGCTTGCAGCTGTAATTGCTGCAACTGATAAGTTTGATTGCCTTAGTCAGTTTGTGCAGACGAAGGGCTTGCCTGTGTATGATGAATGGCTCCAAGAGGTCCATAAGGGGAAGATTGGTGATGGAAGTGGGTCTAGGGATGGTGATAAATCTGTTGAGGAATTTCTTTTGGTATTACTTCGGGCACTTGATAAGCTTCCTGTAAATCTTCAAGCTCTGCAGACATGCAACATTGGTAAATCTGTGAATCATTTGCGAACTCATAAGAACTCAGAAATCCAGAAGAAAGCTAGGGGATTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATTAATGATGCAAAAGCTGGTTCAGTTCAAACTGTCCCATGGCCTACTAGAACACGCCTTTCTGAAGTTGCTCAAGGTGGGAATAGAAATTCGGGTGGATCATCTGACGTTGCTGTCAAGAGCTCAGTTACACAGCTATCTGCATCCAAAACTTCCTCTGTGAAGATTGCTCAGGGAGAGAATGCTACCAGATCTGCATCTCCTGGGTCTATGAGGTCAGTGCCCTCACCAACCTCTGCAACTATGAACTCAAAAGATGGACAGCCCCGTGCTGCTGCTCTCAGTGGAGTTTCTGATCTTCCAATGGCGAATGCAAGGGATGAGAAAAGTAGCAGTTCTAGTCAATCTCATAATAACAGCCAATCTTGTTCTAGTGACCATGCTAAAACTGGCGGTTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACAGCTATGAGTGTGAATAAAATATCAGGCAGTTCTTCACGGCACCGGAAGTCTGTTAATGGAATCCCTGGTTCAACTCCATCTGGAGGGCAAAGGGAGTCTGGGCGAAATTCTTCCTTGCACAAAAATTCAGCCTCTGAAAAATTATCACAATCTGGATTGACAGAAAAGGCTCTTGATGGGACTTCTCTTGAGGGAAGTACTCCTAAGCTGATTGTTAAGATTCCAAACCGAGGTCGTAGTCCTGCAGAAAGTGCCAGCGGTGGTTCTTTTGATGATCCTTCAATTATGAACAGTCAAGCTTCATCTCCTGTCCTTTCAGAGAAGAATGATCAATGTGATAATAGCTCAAAGGAAAAGATTGACTTTTATCGAGCTAATATTGGCTCAGATATTAATACCGAATCCTGGCAGAGTAATGATTTTAAAGATGTAATGACAGGGTCTGATGAGGGTGATGGATCACCTGCTGCTGTTACTGATGAAGAGCGCTGTAGGACTGTTGATGATTCTAAGAAGATGGTGGAAGCATCAAAAGCTGCTTCCTCATCATCTGGAAATGAAAATAAGGCAGTGAATATGCAGGATGCTTCTTTCAGCTCCATAAATGCATTAATTGAAAGTTGTGTAAAGTATTCTGAAGCTAATGCGTCTTTGTCAGCTGTTGATGATGGTGGAATGAATCTTCTTGCCAGCGTGGCGGCTGGAGAGATTTCGAAATCTGAATTGGGAACCCCAGCTGGATCACCGGAAAGAAACACTACAGTTGAACCATCATGTGCAGTCAATGCTATGGACACTGAAGAAAATCGACATGAATGTTGCATGAATAATGGCATTGATGAACATAAGAAGCAGGATACTGTATCTGGTGATTCATGTGCAAATAATGATGATAATGATTCAGGTCCTTTCGCATCTGAAGTGAAAGTTGCTGAAGAGCAAAAGCATGTCACTTCATCTAGTGCGGATATGCAGCGGGTTTCAAAAACTTGTCTAGAAAGCAAAGAAAAATTGAGTGAAATACCAGTTGCTGCCTCATTGGCTGCATTTCCTGAAAGTGCTGTGCAAGAAACCAGAGATGGTGACTGTAGTAAACAGCCCAAGGAGAAAAAACATGTTGGTATTATTGATACAAGTGGTAATGTTGATGTTAAAGTTAATGATGTTGCAAGAGAAGTTGAGATGGGCGCAATTCAAAAATCATCATCACAACCCTCTGCAGAGGTTGATGTTAAGGGTGATAATTGTACAACTGAGGGATTAAGCAGTGGTGGACGCACAGCTCAGAAGGTTCCTGCCATTGTTATGCAGTCCAATTTAGTAAAAGGAACTGATGAGAATGTGCTTAATCCTTCTGGTTGTAGTGTTGGTAAGGCTGCAGAAGACCTCAGTGAAAGAGAATCCAAAAAGACTGATGATGTGGCTACACAAAATCATGCTAGTCAGTCTGAAATGCAAAGAAATGAGTGTGAAAGTGATGCTGTGACAATGCCTGAGAACAGAAGTACAGCTGGTTTAGGTTCAGGTGTCACTGGTCATGCTGCTGAGTATGTGGAGGAGAATTTAGAAACAAAAGAGGTTCATGACCAACATGCTGGACAGAATCTGCAGAGAGTTTCACCGAGCATTTCATCACAAGACATGGAGCAGTGTCTGGGTTCTAAAGGGTCAAAATTGACTGCCATGGATGCAGAGGAAGCTGAGGAGTGCACCTCTACCACTGCAGATGCCTCTTCCATGTCTGCTGCTGGCGTGTCAGATGTGGCGGATGCAAAAATTGAATTTGATTTAAATGAAGGCTTTAGTGCAGATGATGGAAAATCTGGTGAGTTCAATAGCATTGCCATTACTGGATGTGCACCTGCTGTACGAGTGATTAGTCCTGTGCCATTCCCTGTTTCAACTATGTCTAGTGGTATTCCTGCCTCAATCACTGTAGCTGCTGCTGCGAAGGGGCCCTTTATGCCACCTGATGACTTGTTGAAAAGTAAAGGGGAGCTTGGTTGGAAGGGATCTGCTGCCACTAGTGCATTCAGGCCTGCTGAGCCCAGAAAAGCTGTGGAAATGCCCCTGGGTACACCATCTGCTCCTATATCTGATGCTGCAGTTGGAAAGCAGAGTCGACAACTATTGGATATTGACCTGAATGTGCCTGATGAAAGGATACTTGATGATGTTGCCTCTCAAACTAGTTCTCATCAGACAGATGGTGTTTCTCTTACAGTAAAAAATTGTGACCAAGCATGCAATAAAAAAATGGTATCACCTGTTCGCTGCTCTGGAGGTCTTGGTCTTGACTTGAACCAAATAGATGAAGCTTCTGATGTGGGCAATTGCTCCATGAGCAATGGTCTTAAAATGGATGTACCACTTCTGCAGTCAAAACTGTCTTCCGGTGGTCATACAATTAGAGAGGTAAGTGCCATCAGGGACTTCGATTTGAACGATGGCCCTGCAGTTGATGAAGTCATCACGGAACCATCATTGTTCACTCACCATGCCAGAAGCAGTGTGCCATCACAAACTCCTGTTTCTGGGCCTAGAACGAGCAGTACTGAACTAGGGAGCTTCTCATCATGGTTTTCTTCCACTGGGAACACCTATTCAGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCACCTAATGGGCCCCAAAGAATGCTGGGTCCTGCTACTGGTGGCAGTCCATTTGGAGCAGATGTTTATAGAGGACCAGTGTTGTCATCTTCGGCATTGCCATATCCATCTACACCATATCAGTATCCTGTTTTCCCGTTTAATTCCAGCTTTCCTCTTCCTTCATCGTCATTTTCAGGTGGATCAACTACTTATGTAGATTCAGCATCTGGTGGAAGGCTTTGCTTTCCTACAGTAAATTCACAGTTAATAGGACCTGCCAGTACAATTTCATCTCACTATCCTAGGCCTTGTGTCTTTAGTCTTCCTGATGGGAGTGGTACTGGTGAGAGTAGTAAGAAATGGAGAGGACAGGGTTTAGATCTTAATGCTGGTCCTGGAGGTCCTGACATAGAGGGGAGAGATGAGAGTTCAGCTCTTATGCCAAGGCAACTTCCTGTTGCCAGTTCGCAGGCCCTAGCTGAGGAGCAGGCAAGGATTTTCCAGTTGGCTGGTGGTGTTCTCAAGAGGAAGGAACCTGATGGTGGATGGGATAGCTACAAGCAATCGTCATGGCCATAG 4905 0.4402 MHGRGGEERKRTRHMWTTPTRGHLIVSAAPDVSSSSSSSSATSFCKDGRKISVGDCALFKPAQKCPPFVGIIRSLTGCKEGKLKVVVNWLYRSAEVNLGEGLLLETAPNEIFYSFHKDEIPAASLLHPCKVAFLPKGVELPSGISSFVCRRVYDIANKCLWWLTDQDYINECQEEVDQLLYKTRIEMHATVQPGGRSPKPMSSPTSSQLKSGSDSVQNSASFPSQVKGMKRERVDQGSEPVKRERVTKIEDGDSGHSRQESILKAEIAKITEKGGLVNTEGVEKLVQLMIPARNVKKIDLASRSMLAAVIAATDKFDCLSQFVQTKGLPVYDEWLQEVHKGKIGDGSGSRDGDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINDAKAGSVQTVPWPTRTRLSEVAQGGNRNSGGSSDVAVKSSVTQLSASKTSSVKIAQGENATRSASPGSMRSVPSPTSATMNSKDGQPRAAALSGVSDLPMANARDEKSSSSSQSHNNSQSCSSDHAKTGGFSGKEDARSSTAMSVNKISGSSSRHRKSVNGIPGSTPSGGQRESGRNSSLHKNSASEKLSQSGLTEKALDGTSLEGSTPKLIVKIPNRGRSPAESASGGSFDDPSIMNSQASSPVLSEKNDQCDNSSKEKIDFYRANIGSDINTESWQSNDFKDVMTGSDEGDGSPAAVTDEERCRTVDDSKKMVEASKAASSSSGNENKAVNMQDASFSSINALIESCVKYSEANASLSAVDDGGMNLLASVAAGEISKSELGTPAGSPERNTTVEPSCAVNAMDTEENRHECCMNNGIDEHKKQDTVSGDSCANNDDNDSGPFASEVKVAEEQKHVTSSSADMQRVSKTCLESKEKLSEIPVAASLAAFPESAVQETRDGDCSKQPKEKKHVGIIDTSGNVDVKVNDVAREVEMGAIQKSSSQPSAEVDVKGDNCTTEGLSSGGRTAQKVPAIVMQSNLVKGTDENVLNPSGCSVGKAAEDLSERESKKTDDVATQNHASQSEMQRNECESDAVTMPENRSTAGLGSGVTGHAAEYVEENLETKEVHDQHAGQNLQRVSPSISSQDMEQCLGSKGSKLTAMDAEEAEECTSTTADASSMSAAGVSDVADAKIEFDLNEGFSADDGKSGEFNSIAITGCAPAVRVISPVPFPVSTMSSGIPASITVAAAAKGPFMPPDDLLKSKGELGWKGSAATSAFRPAEPRKAVEMPLGTPSAPISDAAVGKQSRQLLDIDLNVPDERILDDVASQTSSHQTDGVSLTVKNCDQACNKKMVSPVRCSGGLGLDLNQIDEASDVGNCSMSNGLKMDVPLLQSKLSSGGHTIREVSAIRDFDLNDGPAVDEVITEPSLFTHHARSSVPSQTPVSGPRTSSTELGSFSSWFSSTGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLGPATGGSPFGADVYRGPVLSSSALPYPSTPYQYPVFPFNSSFPLPSSSFSGGSTTYVDSASGGRLCFPTVNSQLIGPASTISSHYPRPCVFSLPDGSGTGESSKKWRGQGLDLNAGPGGPDIEGRDESSALMPRQLPVASSQALAEEQARIFQLAGGVLKRKEPDGGWDSYKQSSWP 1634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0814 1634 MobiDBLite consensus disorder prediction 228 260 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 650 670 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 439 677 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 958 985 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 1004 1069 - -
Dere03g0814 1634 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 280 416 IPR035441 -
Dere03g0814 1634 SMART TFS2_5 335 414 IPR003617 GO:0005634
Dere03g0814 1634 CDD TFIIS_I 337 413 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 1553 1585 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 1020 1034 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 1035 1067 - -
Dere03g0814 1634 ProSiteProfiles BAH domain profile. 49 164 IPR001025 GO:0003682
Dere03g0814 1634 MobiDBLite consensus disorder prediction 553 621 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 716 735 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 439 505 - -
Dere03g0814 1634 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 317 425 IPR035441 -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 1093 1111 - -
Dere03g0814 1634 SMART BAH_4 49 164 IPR001025 GO:0003682
Dere03g0814 1634 MobiDBLite consensus disorder prediction 698 749 - -
Dere03g0814 1634 ProSiteProfiles TFIIS N-terminal domain profile. 338 415 IPR017923 -
Dere03g0814 1634 Pfam BAH domain 50 157 IPR001025 GO:0003682
Dere03g0814 1634 Pfam TFIIS helical bundle-like domain 363 412 IPR017923 -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 1085 1111 - -
Dere03g0814 1634 Gene3D - 32 277 IPR043151 -
Dere03g0814 1634 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1633 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 190 260 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 196 225 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 522 546 - -
Dere03g0814 1634 MobiDBLite consensus disorder prediction 958 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0814 Dere-ChrDere03 12693137 12699423 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dere03g0814 BAH 3e-08 No_clan