Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0805 ATGGTGGCCACATCGTGCACGAATTTGTTGGACTTGTTGTCAGGGGACATTTTGAATTTACCTCAAACATCAAGACCACTTTCGCGAGTTATGACTGTTCCAGGAGTTATTTCTGATATAGATGGAAAACAAAGTTCTGGAGATCATGATTCACATGCTTTATCATCAAAAAACCATCAAAAGATAATTATTGTAGCAAATTTTCTTCCCCTCAATGCTCAAAAGGATAAAAAAACTGGCAGATGGTGCTTTAGTTATGATGAAGATTCAATTTTCTTGCAGCTCAAAGATGGTATCTCTTCTGATATCGATGTTATTTATGTGGGATCTCTGAAGGTTAGTATTGATGAAAGTGAACAAGAGAAAGTTTCTCATGAGTTGCTGGAGGAATTCAAATGCTGGCCCACGTTCCTTCCTTCAGACATGCAGAAGCAGTTTTATGACGGATTCTGCAAGCAACATTTGTGGCCTCTATTTCATTACATGTTGCCCATGTTTCCTGATTATGGCAATCGCTTTGATAGGTTGCTTTGGCAGGCTTATGTTTCTGCTAATAAGATATTTGCAGATAAGGTTATGGAGGTTTTAAATTCAGAAGAAGATGATTATGTCTGGGTTCATGATTATCATCTTATGGTTCTCCCAACATTTCTTCGGAAGAAGTACAGTAGGGTCAAGCTAGGATTTTTCCTTCACAGTCCATTTCCTTCATCAGAAATTTATCGGACTCTGCCTGTCAGGGATGAAATTCTGAAAGCACTTCTCAATGCAGATTTAATTGGGTTTCATACATTTGATTATGCTCGCCATTTTCTATCTTGTTGCAGTCGAATGCTTGGCTTGGAATATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTTTGGCCGCACCATATACATTAAAATCTTGCCAGTAGGAATTCATATGGATCGACTTCAATCTGCCTTAAATCACCCATCTTCTTCTGATAAAGTCAGAGAAATTCATGAGCAATTTAAGGGGAAAAAGCTTATTCTCGGTGTTGATGATATGGACATATTTAAAGGCATCAGTTTAAAGCTCTTGGCTGTAGAACAACTCCTTCACCAGAATTCAGAACTGCGTGGTGAATTAGTACTGGTCCAAATTGTAAATCCCCAAAGAGGTTCAGGCAAAGATGTTGAGGAAGCACAGAACGAGATGCACATTATTGCCAGAAGGATAAATGAGAGGTTTGGTTTGCCAAATTATGAACCTGTGATCATCATAGATCATCCTATTCCTTTTTACGAGAAGACAGCCTATTATTTTTTGGCAGAATGTTGCATTGTGAATGCAGTGCGGGACGGTATGAATTTAATTCCGTACAAGTATATTGTGTGTAGGCAAGGGAATACAAAAATGGATGAAGCCTTAGGAATTGCTCTAGAGTCCTCTCGTACAAGTGCACTTGTTGTTTCCGAGTTTATTGGTTGCTCGCCATCTCTTAGCGGGGCATTAAGGGTGAACCCATGGGACACTGGTGCTGTAGCTGATGCAATTAATTTGGCCCTTAGAATGCCCATTGTAGAGAGACAGTTGCGGCATGAGAAGCACTATCGATATGTTAGCTCTCACGATGTGGGTTACTGGGCTCAAAGTTTTGTGCAAGATCTAGTTCGTGCATGCCAGGATCACAACAGCAAACGATGCTGGGGTATTGGCTTTGGACTGAGTTTGAGAATCCTGTCTCTTTCTCCCAATTTTAGGAAGCTGTCCATAGACCACATTGTCTCTGTATATAAAAGGTCAAATCGAAGGGCAATTTTTTTGGACTATGATGGAACAATAGTGCCCCAATCTTCCATTGTTAAAAGCCCGAGTCTTGAAGTCATATCTGTTCTAAATAACCTATGCAGTGACCCCAAGAACACTGTGTTTATAGTTAGTGGCAGGGGAAAGGCCTCATTGGGTGAATGGTTTGATCAGTGTGAGAACCTTGGTATAGCAGCTGAGCATGGCTATTTTATCAGTTGGGGTAAACGGTCAAGTTGGGAAACACATCATATAGCTACAGATTTTGCTTGGAAAAGTATTGCTGAACCTGTGATGAGACTATACACTGAGGCAACGGATGGCTCTTACATTGAGACCAAAGAAAGTGCCTTAGTATGGCACCATAGTGATGCTGATCCTGATTTTGGATCATGGCAGGCCAAGGAGCTGCTGGATCACCTTGAAAGTGTCCTTGCAAGTGATCCAGTGGTTGTTAAAAAGGGACAGCAAATTGTTGAAGTTAAGCCACAGGGAATCACTAAAGGGCTAGTTGCAGAGGAGGTTCTATCTACACTGACCCGGAACGGGAAATCACCAGATTTCATTCTTTGCATTGGGGATGATAGGTCTGACGAGGATATGTTCGAGAGCATATCAACCAAAGTCTATGGAGTAACCCCCTTGTCAGCACCAGAAATCTTTGCTTGCACTGTTGGCCAAAAACCAAGCAAAGCTAGGTACTTCTTAGACGATACCATGAACGTGATGATGTTACTTCAAAGCCTTGGTGCTGCATCAGGGCCAAAACCTAAATGTACAGAAGAAAGCCGCCTTGAAAGAACAGAAACCTGTTTCGAAAACCTTGCTTTGAAAAATGCAGACTCTTCCCGTTGA 2631 0.4132 MVATSCTNLLDLLSGDILNLPQTSRPLSRVMTVPGVISDIDGKQSSGDHDSHALSSKNHQKIIIVANFLPLNAQKDKKTGRWCFSYDEDSIFLQLKDGISSDIDVIYVGSLKVSIDESEQEKVSHELLEEFKCWPTFLPSDMQKQFYDGFCKQHLWPLFHYMLPMFPDYGNRFDRLLWQAYVSANKIFADKVMEVLNSEEDDYVWVHDYHLMVLPTFLRKKYSRVKLGFFLHSPFPSSEIYRTLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYFGRTIYIKILPVGIHMDRLQSALNHPSSSDKVREIHEQFKGKKLILGVDDMDIFKGISLKLLAVEQLLHQNSELRGELVLVQIVNPQRGSGKDVEEAQNEMHIIARRINERFGLPNYEPVIIIDHPIPFYEKTAYYFLAECCIVNAVRDGMNLIPYKYIVCRQGNTKMDEALGIALESSRTSALVVSEFIGCSPSLSGALRVNPWDTGAVADAINLALRMPIVERQLRHEKHYRYVSSHDVGYWAQSFVQDLVRACQDHNSKRCWGIGFGLSLRILSLSPNFRKLSIDHIVSVYKRSNRRAIFLDYDGTIVPQSSIVKSPSLEVISVLNNLCSDPKNTVFIVSGRGKASLGEWFDQCENLGIAAEHGYFISWGKRSSWETHHIATDFAWKSIAEPVMRLYTEATDGSYIETKESALVWHHSDADPDFGSWQAKELLDHLESVLASDPVVVKKGQQIVEVKPQGITKGLVAEEVLSTLTRNGKSPDFILCIGDDRSDEDMFESISTKVYGVTPLSAPEIFACTVGQKPSKARYFLDDTMNVMMLLQSLGAASGPKPKCTEESRLERTETCFENLALKNADSSR 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0805 876 Pfam Glycosyltransferase family 20 61 546 IPR001830 GO:0003824|GO:0005992
Dere03g0805 876 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 550 - -
Dere03g0805 876 CDD GT20_TPS 61 546 IPR001830 GO:0003824|GO:0005992
Dere03g0805 876 Gene3D Glycogen Phosphorylase B; 315 531 - -
Dere03g0805 876 CDD HAD_TPP 595 836 - -
Dere03g0805 876 Gene3D - 723 854 IPR023214 -
Dere03g0805 876 Gene3D - 593 712 IPR023214 -
Dere03g0805 876 NCBIfam trehalose-phosphatase 592 841 IPR003337 GO:0003824|GO:0005992
Dere03g0805 876 SUPERFAMILY HAD-like 594 842 IPR036412 -
Dere03g0805 876 NCBIfam HAD-IIB family hydrolase 595 799 IPR006379 -
Dere03g0805 876 FunFam Alpha,alpha-trehalose-phosphate synthase 316 531 - -
Dere03g0805 876 Pfam Trehalose-phosphatase 597 831 IPR003337 GO:0003824|GO:0005992
Dere03g0805 876 Gene3D Glycogen Phosphorylase B; 52 314 - -
Dere03g0805 876 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 843 IPR001830 GO:0003824|GO:0005992
Dere03g0805 876 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 314 - -
Dere03g0805 876 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 593 710 - -
Dere03g0805 876 FunFam Trehalose-6-phosphate synthase 10 724 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0805 Dere-ChrDere03 12614812 12617660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0805 1 867 Trehalose Biosynthesis Gene Families AT1G23870 68.318 0.0 1265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0805 03 12614812 12617660 Dere14g0548 14 5625802 5630587 CCT