Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0800 ATGAAGGAGGTGGCTGTTGGGTTTGTGAGGGCGGATCAGATTGATCTGAAGAGCATAGATGAACAGCTCGAGAGGCATGTGAACAAGGCATTGACCTTGGAGAAGCTCAAGAGTAAAGAGGAAGATACGCCTGCTGCTAATACCGGCGCTACTGCCATTAAAAGTCTAAGCGGTGGTGGTGGGGGTGCCTTCCAGAGGCAAAGGCAGGAGTGGGAGATTGACCCTTCCAAGCTAATCATCAAGAGTGTTATAGCTCGTGGTACTTTCGGCACCGTCCATCGCGGTATCTATGATGGTCAAGATGTCGCTGTTAAAATGTTGGATTGGGGTGAAGAAGGCCACAGGACAGAAGCTGAAATTGCTTCATTAAGGGCTGCGTTTACACAAGAAGTTGCTGTTTGGCATAAACTTGATCATCCTAATGTCACTAAGTTTATAGGGGCAACAACAGGATTGTCAGAATTACAGATACAAACTGAAGGTGGTCTAGTTACCGTGCCAGGCAATGCCTGTTGCGTCGTTGTGGAGTATCTTCCTGGGGGTCTAAAATCTTACCTAATAAAGAACAGGAGAAGAAAGTTAGCATTCAAGGTTGTGATCCAGCTGGCCCTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAAAAAATTGTCCACAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGAAAGGTACAGTCAAGATTGCTGATTTTGGGGTTGCGCGAGTTGAGGCTTCAAATCCTAATGACATGACTGGGGAGACTGGTACACTTGGTTACATGGCTCCAGAGGTTTTAAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTGTGGGAGATATATTGTTGTGACATGCCATATCCCGACCTAAGTTTTGCAGAGGTTACTTCAGCTGTCGTTCGCCAGAACCTGAGACCAGAAATACCAAGATGCTGCCCCAGTTCTCTAGGAAATGTAATGAAGAGATGCTGGGATGCCAATCCTGATAAGCGACCAGAGATGGACGAGGTCGTTTCCATGTTAGAGGCCATTGACACATCAAAAGGTGGAGGTATGATCCCTATTGATCAGCAGCAAGGTTGTCTTTGCTTCCGCAAGTACAGAGGGCCTTAA 1143 0.4619 MKEVAVGFVRADQIDLKSIDEQLERHVNKALTLEKLKSKEEDTPAANTGATAIKSLSGGGGGAFQRQRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKMLDWGEEGHRTEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATTGLSELQIQTEGGLVTVPGNACCVVVEYLPGGLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKKGTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFAEVTSAVVRQNLRPEIPRCCPSSLGNVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPIDQQQGCLCFRKYRGP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0800 380 SMART serkin_6 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0800 380 CDD STKc_MAP3K-like 84 351 - -
Dere03g0800 380 MobiDBLite consensus disorder prediction 39 64 - -
Dere03g0800 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Dere03g0800 380 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Dere03g0800 380 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Dere03g0800 380 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Dere03g0800 380 Gene3D Transferase(Phosphotransferase) domain 1 179 369 - -
Dere03g0800 380 FunFam Serine/threonine-protein kinase HT1 178 362 - -
Dere03g0800 380 FunFam Kinase suppressor of Ras 1 67 161 - -
Dere03g0800 380 Gene3D Phosphorylase Kinase; domain 1 66 161 - -
Dere03g0800 380 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 40 354 - -
Dere03g0800 380 SUPERFAMILY Protein kinase-like (PK-like) 66 351 IPR011009 -
Dere03g0800 380 ProSiteProfiles Protein kinase domain profile. 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0800 380 Pfam Protein tyrosine and serine/threonine kinase 80 351 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0800 Dere-ChrDere03 12553658 12556941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0800 1 312 MAP Kinase Kinase Kinase AT5G50000 82.650 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere03g0800 PK_Tyr_Ser-Thr 2.3e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0800 03 12553658 12556941 Dere03g0800 03 12553658 12556941 ECH