Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0792 ATGAGGAATTTTTGCTGGTTTAAACAAGTTCTAAGCAACGAAAAATCAAGGGGAAGGCTTTCGCTTGGGGAATTCAAGCGAGCTGTGTCGTGGTCCAAGTATCTGGTCTCCTCTGGGGCTGCCATAAAGGAAGAAGGAGAAGAGGATTGGAGCGCCGATTTGTCTAGCTTACTCATTGGCCCCAAATGTGCGAGGGGCAAATATAGTAGGATCTACAGAGGCGTTTACAAGAACAAGAAAGTGGCTATTAAGTTGATAAGTCTACCAGAGGAAGACGAGCACTTGGCTGCTAGGCTTGAGAGGCAGTTTAATTCAGAAGTTGCCTTGCTCTTTCGGTTGCACCATCCAAATATCATCAAGCTCGTTGCCACTTGCAAGAAATCTCCTGTATTCTGTATCATTACTGAATATATGCCTGGGGGATCATTGAGAAGATACCTGCGTATGCAAAATCCCTATTCACTATCACCCAAACTTATTCTGAAATTAGCCCTAGACATTGCTCGGGGTATGCAATATCTTCATTCTCAGGGGATACTTCATAGGGATCTCAAATCAGAAAATCTACTGTTGGGAGGAGATATGCATGTAAAAGTAGCAGACTTTGGAATTTCTTCCCCAGAATCTGAGTGCTTTGTTGCTGGTGAATTTATGGGAACTTACCGTTGGATGGCACCTGAAATATTGAAAAGTATGAATCATACCAAGAAAACAGATGTCTACAGTTTTGGCATAATTCTGTGGGAGCTTTTAACAGCATTGACACCGTACGAAAACATGACACCAGAGCAGGCAGCATTTGCAGTCTGCGAAAGGAATCTAAGGCCACCATTGCCACCTGAATGTCCATTGGCATTTAGCTGTCTGATGACCAGATGCTGGGCAGCCAATCCACATAAACGACCACATTTTGATGAGATAGTTTCCATTTTGGAGGGCTACTCGGAATCACTGAAGGAGGATCCAGAATTCTTCTCTAATTTCATACCACCACCTGCTAGTAGTAATATTATATTGGAACTCTTACCAGAGTGCATTTCTGGGCGTATACCTGCTTCTTGCTAA 1065 0.4329 MRNFCWFKQVLSNEKSRGRLSLGEFKRAVSWSKYLVSSGAAIKEEGEEDWSADLSSLLIGPKCARGKYSRIYRGVYKNKKVAIKLISLPEEDEHLAARLERQFNSEVALLFRLHHPNIIKLVATCKKSPVFCIITEYMPGGSLRRYLRMQNPYSLSPKLILKLALDIARGMQYLHSQGILHRDLKSENLLLGGDMHVKVADFGISSPESECFVAGEFMGTYRWMAPEILKSMNHTKKTDVYSFGIILWELLTALTPYENMTPEQAAFAVCERNLRPPLPPECPLAFSCLMTRCWAANPHKRPHFDEIVSILEGYSESLKEDPEFFSNFIPPPASSNIILELLPECISGRIPASC 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0792 354 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 316 - -
Dere03g0792 354 Gene3D Phosphorylase Kinase; domain 1 46 138 - -
Dere03g0792 354 ProSiteProfiles Protein kinase domain profile. 57 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0792 354 Pfam Protein tyrosine and serine/threonine kinase 62 311 IPR001245 GO:0004672|GO:0006468
Dere03g0792 354 SMART serkin_6 57 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0792 354 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Dere03g0792 354 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Dere03g0792 354 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Dere03g0792 354 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Dere03g0792 354 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Dere03g0792 354 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
Dere03g0792 354 CDD STKc_MAP3K-like 63 311 - -
Dere03g0792 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Dere03g0792 354 Gene3D Transferase(Phosphotransferase) domain 1 139 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0792 Dere-ChrDere03 12473438 12477202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0792 25 320 MAP Kinase Kinase Kinase AT1G62400 58.528 8.46e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dere03g0792 PK_Tyr_Ser-Thr 1.6e-65 CL0016