Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0773 ATGGATCTGGAGACAAAGATCAGAGAAAACTATAACTCCCAGCCAATGCAATTGCTAGAAATGAACATGAAATCCAACACGAAAGATCTCGAGCTTCCTGCTTTTGGAGTTCCTTCATTGCAGGGTAATTTCATGCAAGATTTACTCCATATTGATCCATTTCACGTAAATGGGTCTTCATCAAATCCACCACTCTTGGGGGTCCAAACTCCAAATTTTGTTAACCCTTTTGATAGTTTCACGTATGGGTGTTCATCAGCAGGTTTTGATGCTTATGAGCCAAAACCATTCTTTGAAAATAATGTCACTAAAGGGCATGCCCATGTTATGGACAATTTCCAGTATGGAGGTAATAGTTATTGCCTCAACGTCCCTCATGAGAGGAATCAAATGGAAATGATGGAAGCAAACCAGGGTAATTATTGTGTGCCTTTTGACCCTCAAGAAATCAAGCCTATGATGAATTTTGTTGTACCGGATGATGAAGTCTCATGCATATCTCCAAATCATAGTTTTTGCAGAAGTGTTGGCTTGAATAATAGAAATAACAGGACGTCGGCTCCAATTAGAAGGCCATGCAAACTTCGGAACAAGTCCAACGTAGTAAAGGGACAGTGGACGGTAGAAGAAGATAGGTTGCTTATTCAACTGGTGGAACAATACGGCATGAGAAAGTGGTCCCATATTGCTCAGAGTTTGCCTGGGAGAATAGGCAAACAATGTAGAGAGCGTTGGCATAACCATTTAAGGCCTGACATTAAGAAGGACACATGGAGTAATGAAGAAGATAAGATACTGATCGAAGCCCACGCAGAGATAGGAAATAAGTGGGCTGAGATTGCTAAGAAACTGCCTGGAAGAACTGAAAACTCCATAAAGAACCATTGGAATGCGACCAAGAGAAGGCAATATTCAAAAAGAAAGTGTCGCTCGAAGTACCCTAGACCCTCTCTTCTTCAGGAATACATCAAGAGCTTGAACTTAGACAAAAACCCACCCATAGATTATCGGAAAAGATCTTCGTCTTCTGCTAACACTAACAACAACAACAACAATAATAGTAATAATCATATGACTAGCACAAAGAAAGCAGCAGCAGGAGATCAGTTTTGTCCCGACAATGACCGATTGGTACCTATTTACGACTTTAACGAGGTCCCAGATTTTTGTTTCGACGAGAACTTGAATCTATTTCAAGAGGGGTGCAATATTGATGCTCTGCTGGATGATATGCCATGTGCTCCTCCTACTATGCATGAGGGAGATTTCGAAGGAAAGTTGCAATATTGTGGCGATGTTGTTGTTAATAATAATAATAATCTCCATGGGAATAATCATTTTGAGACTGGGAAGTCACAGGAGATGGAAGTAAAGAGGGAGATGGATTTGGTGGAGATGATGTCTCAGATTTTGAAGGATGGTGTAGAGATGGATCGATGTGTTTCAGAAGCACAACATCCTTGGAATAGAGGTGACGAGAAAGAATGTCCAGAATCCAGAAACTGA 1506 0.4084 MDLETKIRENYNSQPMQLLEMNMKSNTKDLELPAFGVPSLQGNFMQDLLHIDPFHVNGSSSNPPLLGVQTPNFVNPFDSFTYGCSSAGFDAYEPKPFFENNVTKGHAHVMDNFQYGGNSYCLNVPHERNQMEMMEANQGNYCVPFDPQEIKPMMNFVVPDDEVSCISPNHSFCRSVGLNNRNNRTSAPIRRPCKLRNKSNVVKGQWTVEEDRLLIQLVEQYGMRKWSHIAQSLPGRIGKQCRERWHNHLRPDIKKDTWSNEEDKILIEAHAEIGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRPSLLQEYIKSLNLDKNPPIDYRKRSSSSANTNNNNNNNSNNHMTSTKKAAAGDQFCPDNDRLVPIYDFNEVPDFCFDENLNLFQEGCNIDALLDDMPCAPPTMHEGDFEGKLQYCGDVVVNNNNNLHGNNHFETGKSQEMEVKREMDLVEMMSQILKDGVEMDRCVSEAQHPWNRGDEKECPESRN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0773 501 CDD SANT 206 249 IPR001005 -
Dere03g0773 501 PANTHER MYB PROTEIN-RELATED 181 356 - -
Dere03g0773 501 FunFam Transcription factor MYB119 256 320 - -
Dere03g0773 501 FunFam Transcriptional activator Myb isoform A 202 255 - -
Dere03g0773 501 Pfam Myb-like DNA-binding domain 206 264 - -
Dere03g0773 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 253 IPR017930 -
Dere03g0773 501 ProSiteProfiles Myb-like domain profile. 198 249 IPR001005 -
Dere03g0773 501 MobiDBLite consensus disorder prediction 330 367 - -
Dere03g0773 501 SUPERFAMILY Homeodomain-like 200 296 IPR009057 -
Dere03g0773 501 Gene3D - 202 254 - -
Dere03g0773 501 MobiDBLite consensus disorder prediction 337 363 - -
Dere03g0773 501 SMART sant 202 251 IPR001005 -
Dere03g0773 501 SMART sant 254 302 IPR001005 -
Dere03g0773 501 MobiDBLite consensus disorder prediction 291 312 - -
Dere03g0773 501 CDD SANT 257 300 IPR001005 -
Dere03g0773 501 Gene3D - 256 308 - -
Dere03g0773 501 ProSiteProfiles Myb-like domain profile. 250 300 IPR001005 -
Dere03g0773 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 254 304 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0773 Dere-ChrDere03 12246785 12248625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0773 64 412 MYB Transcription Factor Family AT4G18770 49.459 3.86e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere03g0773 Myb_DNA-bind_6 5.6e-20 CL0123