Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0757 ATGGAGAACTTGTTCGGCTTCGACTACACCGTCGGTTACTCCGAGCAGTCATCAATGGCTCCATCATTATCACCACCTGGTCTTCAGGACTTCACAGCACAATCACACCATATGGTTCCGTTAAATTGGACATCAGGAAGCGGACCCGAGCAATTTGCCCTGTCTGGTTCTTCTTCATCGGTGGCAATATCGGATGCTCCGTCGACAGCGGTGGCGGAAGTTCAGAGAGTGGAAGCTGGCCTAGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTTCTCAAAAACTACGCGCTAAAATCGTTTGTCATCCTTTGTATCCTAAACTACTGGATGGCTATATCGATTGCCAAAAGGTTGGAGCGCCGCCGGAGACAGCGAAACTGTTAGATGAAATCGGACGAGTGGATGGCGATCTATGTCAGAGATCTGCTTGCTTGGGTGCTGATCCCGAGCTCGACGAGTTCATGGAAACGTATTGCGATTTATTGGTGAAGTACAAATCGGATCTCTCGAAGCCGTTTGACGAGGCAACCGCGTTTCTTAACGACATGGAAACTCAGCTTAACTCCCTCTGCAACGGCCCTTCACGAAACTACAGTCCCGGTCTTTCTCTCTAA 615 0.5024 MENLFGFDYTVGYSEQSSMAPSLSPPGLQDFTAQSHHMVPLNWTSGSGPEQFALSGSSSSVAISDAPSTAVAEVQRVEAGLEEEEEEEEEVSQKLRAKIVCHPLYPKLLDGYIDCQKVGAPPETAKLLDEIGRVDGDLCQRSACLGADPELDEFMETYCDLLVKYKSDLSKPFDEATAFLNDMETQLNSLCNGPSRNYSPGLSL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0757 204 SMART KNOX2_2 141 192 IPR005541 GO:0003677|GO:0005634
Dere03g0757 204 Pfam KNOX1 domain 95 133 IPR005540 GO:0003677|GO:0005634
Dere03g0757 204 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 78 194 - -
Dere03g0757 204 SMART KNOX1_2 93 137 IPR005540 GO:0003677|GO:0005634
Dere03g0757 204 Pfam KNOX2 domain 145 191 IPR005541 GO:0003677|GO:0005634
Dere03g0757 204 Coils Coil 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0757 Dere-ChrDere03 12073970 12075328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0757 95 193 Homeobox Transcription Factor Family AT1G23380 65.714 1.08e-41 142