Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0755 ATGTTGCGGGGTGGTGCACTCAACCTGACAAATGACAATACCGATAATAGGGCACCGTCAATGTTGAATTTTGACGGTCGTGACCTCGCCTTCACAGACAAATCTACTGACTGTGATATGACCCTACAAACTTTTGTTCACTCTCTCCTTGCTTTCCCTTTCGTCCTCAGCCCTTGGTCACCATGTTATGAAGGTACTGGATCGTCCGAAGATGACATCAGTAGAGAAGAGAAAGAGGAAAACGAATGTAAGAGGATCAATGAAGATCGGGAGCTGAAGGATAAGCTTCTACGTAGATATAGTGGCTATATCAGCAGTCTAAAGCATGAATTTTCTAAGAAGAAGAAGAAAGAAAAGCTACCCAAAGAGGCCAGACAAATATTACTGGCATGGTGGGATATTCATTTCAAATGGCCATACCCTACGGAAGCGGATAAGGTTGCGTTAGCTGAATGGACAGGTCTGGATCAGAAACAGATAAACAATTGGTTTATAAACCAAAGGAAGCGCCATTGGAAGCCAACCGAGGAAATGCAAGATGCAGTTTTGGATGGCCTCTATGGACCATTTTCCACGAGTGATTGA 585 0.4376 MLRGGALNLTNDNTDNRAPSMLNFDGRDLAFTDKSTDCDMTLQTFVHSLLAFPFVLSPWSPCYEGTGSSEDDISREEKEENECKRINEDRELKDKLLRRYSGYISSLKHEFSKKKKKEKLPKEARQILLAWWDIHFKWPYPTEADKVALAEWTGLDQKQINNWFINQRKRHWKPTEEMQDAVLDGLYGPFSTSD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0755 194 SUPERFAMILY Homeodomain-like 112 185 IPR009057 -
Dere03g0755 194 Pfam ELK domain 91 112 IPR005539 GO:0003677
Dere03g0755 194 Pfam Homeobox KN domain 131 170 IPR008422 GO:0003677|GO:0006355
Dere03g0755 194 Gene3D - 108 182 - -
Dere03g0755 194 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 78 179 - -
Dere03g0755 194 CDD homeodomain 125 174 IPR001356 GO:0003677
Dere03g0755 194 SMART HOX_1 113 178 IPR001356 GO:0003677
Dere03g0755 194 ProSiteProfiles ELK domain profile. 91 111 IPR005539 GO:0003677
Dere03g0755 194 ProSiteProfiles 'Homeobox' domain profile. 111 174 IPR001356 GO:0003677
Dere03g0755 194 SMART ELK_2 91 112 IPR005539 GO:0003677
Dere03g0755 194 ProSitePatterns 'Homeobox' domain signature. 149 172 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0755 Dere-ChrDere03 12066161 12069716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0755 64 193 Homeobox Transcription Factor Family AT4G08150 63.158 1.28e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dere03g0755 Homeobox_KN 8.1e-16 CL0123