Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0743 ATGCCTGAAAACCCATGGACCCTCATCTTCCTATCATCTGCCCTTTTACTTCTTTTCCATTCCTTTATAGTTTCTGCAGTTAACCCACAAGGGCAAGCTCTTCTTTCATGGAAGACATCACTGAACGGGTCCTCGGAGGTGCTGAATAATTGGGACCCAAGTGACGAAACGCCATGTGGGTGGTTTGGAGTTAGCTGCAACTTCGAGAACGAGGTTGCACAGTTAGATCTGAGGTATGTAGATTTGCTTGGAACGGTTCCTTCTAATTTCACCTCATTGCTTTCCTTGACCAAGCTTATCCTTATTGGATCGAACCTCACTGGTTCAATCCCAAAAGAGATAGGTACTCTCAGCAACCTTAGCTACTTGGACTTAAGTGACAATGCCTTGACTGGTGAAATCCCAAGTGAGCTTTGCTTTCTGCCTAGGCTTGAAGAACTCTATCTGAATTCAAACCAGCTTGTGGGATCGATTCCAATTGCAATTGGGAATCTCACGAAGTTGGGGTGGCTGATCTTATATGATAATCAACTAAGTGGTGAAATTCCCTCAACAATTGGCAATCTGAAAAACCTGCAAGTGATTAGAGCCGGTGGAAACAAGAACCTTGAAAGTGCTTTACCTCAAGAAATAGGAAACTGTACCAAATTGGTCATGTTAGGTTTAGCTGAAACAAGTATCTCAGGATTTCTTCCACCAACTCTAGGCCTCCTCAAGCAGCTGAACACCATTGCAATTTACACTTCCCTCCTCTCAGGCCAGATTCCTCCTGAACTCGGTGACTGCACTGAACTTCAGAACATTTATCTGTACGAGAACTCCCTCACTGGATCACTACCTAGCAAATTGGGAAATCTTAGGAATCTCAAGAATCTTCTACTATGGCAAAACAATTTAGTCGGCACCATCCCACCGGAACTTGGAAATTGCTATCAGTTATCCGTCATTGACATCTCAATGAACTCGCTTACAGCAAGCATTCCCAAGAGTTTTGGAAATTTGACGGCGCTGGAAGAGCTCCAACTTAGCGAAAACCAGATTTCAGGGGAGATTCCTACAGAGCTAGGGAACTGCGAGCAACTCACTCACGTCGAGCTGGACAATAATCAAATGACGGGTACGATACCTTCTGAATTTGGAAATCTTAGTAATCTAACGTTGTTGTTCCTGTGGCATAACAAGCTCGAAGGAAATATACCGTCTTCGCTTTCCAATTGTCCAAACCTCGAGGCTGTGGATCTGTCACAGAATGCACTGACCGGTCCCATACCAAAGGGGATATTCGAGCTCAAGAACCTGAACAAGCTTTTGCTACTTTCTAATAATCTCTCGGGAAATATACCATCTGAAATTGGAAATTGTTCGTCCTTAGTTCGGTTCCGAGCGAGCAACAATAAGATCACAGGGAGCATACCCCCACAGATTGGGAATCTGAGACACTTGAATTTTTTGGATCTTGCAAGCAATCGGATTTCCGGAGTTATTCCGGAAGAGATCTCAGGCAGCCGGAACCTCACGTTTTTAGACCTACATTCCAACATGATCGCTGGGAGCTTGCCGGCGAGTCTGAGTCAGCTTGTCTCGCTTCAATTTATTGACGTCTCCGATAACATGATCGAAGGTACACTAAGCCCGAGACTAGGATCGCTTGGCTCACTCACAAAACTGGTCCTCGGAAAGAATCATATCTCTGGATCAATTCCGAGTCAACTCGGTTCCTGTGCTAAGCTTCAGTTGCTGGATCTCAGCAGCAATAATCTCACTGGCAATATCCCCGGTAGTATTGGTAATATTCCGGCTCTGGAAATCGCACTGAATCTGAGCTGGAATCAACTCTCCGGCGAAATTCCTCAGCAGTTTTCAGCCTTGGTTAAGCTCGGAATCTTGGACATTTCGCATAACGAGCTCACCGGAAACCTTCAATATCTAGCCGGCCTCCAAAATCTCGTCGTCCTCAATATCTCTTACAACAAATTCTCCGGGCGCGTCCCGAACACGCCTTTCTTCGCAAAGCTTCCTCTTAGTATGCTCGCCGGGAACCCCTCGCTCTGCTTCTCCGGTAATCAATGCGCCGGAGATGATTCCGGAAGTCGCTTGGGCAGGCGGGCGAAGACGGCCCGTATAGCCATGGTGGTCCTACTTTGCACCGCATGTGCTCTCCTCTTGGCGGCGCTTTACGTCGTCGTCGCGGCAAAACGACGACGCAGGGGCCAAGGAAGCGATCACGACCTCGATGGAAGCGATAGCGACGTGGAGATAGGCCCACCATGGGAGGTGACACTGTACCAGAAGCTCGACCTGTCAATCTCTGACGTGGCAAAGTGCCTCACAGCTGGCAATGTCATTGGGCGGGGACGGTCGGGGGTCGTTTACAAGGTGAACATGCCGGCGGGAATAGATGTCGCCGTGAAGAGGCTGAGGTCGTCGGAGAAATTCTCAGCTGCAGCGTTCTCGTCGGAGACAGCGACGTTGGCGAGAATACGACACCGTAATATCGTGAGGCTATTGGGTTGGGCAGGGAACCGGTGGACGAAGCTACTGTTTTATGATTATTTACCGAACGGTAATCTGGATACGCTTTTACACGAGGGGTGCACGGAATTGATCGAGTGGGAGACACGGTTCAAGATAGCTTTGGGCGTGGCTGAAGGCTTAGCTTACTTGCACCATGACTGCGTGCCTGCTATCTTGCACCGGGACGTAAAAGCGCACAACATCTTGTTGGGAGACACGTACGAACCGTGTTTGGCAGATTTTGGTTTCGCTAGATTGGTAGAAGACGACCACGGTTCCTTCTCGTTGAACCCACAGTTCGCGGGTTCTTACGGCTACATTGCGCCGGAGTATGGTTGCATGCTGAAAATAACAGAGAAGAGCGACGTGTACAGCTACGGAGTGGTGCTTCTGGAGATAATAACAGGGAAGAGACCCGCGGACGCGTCATTCGCAGAAGGACAACACGTCATAGAGTGGGTGAGAGAGCACCTGAAGAAGAAGAAGGACCCTGTGGACATCGTCGATCCCAAGCTTCAAGGCCTCCCCGACACTCACATTCAGGAGATGCTTCAAGCTCTCGGAATCTCCCTCCTCTGTACCAGCACTCGCCCCGACGACCGCCCCACCATGAAAGACGTCGCCGCTCTATTACGAGAAATCCGACACGACCCTCCTCTGGGCCTTGAGGCCCACAAGCCCAACCCCGTGCCCACCACCACTAACTCTTCTTCTTCCTCTGTCACTCCGGCTCAGTGGTTGCTCCTTCATCCCTCGTCTCATTCTTCGTCACTTAATTATTCTTCGTCTACTGTACCATAA 3315 0.4917 MPENPWTLIFLSSALLLLFHSFIVSAVNPQGQALLSWKTSLNGSSEVLNNWDPSDETPCGWFGVSCNFENEVAQLDLRYVDLLGTVPSNFTSLLSLTKLILIGSNLTGSIPKEIGTLSNLSYLDLSDNALTGEIPSELCFLPRLEELYLNSNQLVGSIPIAIGNLTKLGWLILYDNQLSGEIPSTIGNLKNLQVIRAGGNKNLESALPQEIGNCTKLVMLGLAETSISGFLPPTLGLLKQLNTIAIYTSLLSGQIPPELGDCTELQNIYLYENSLTGSLPSKLGNLRNLKNLLLWQNNLVGTIPPELGNCYQLSVIDISMNSLTASIPKSFGNLTALEELQLSENQISGEIPTELGNCEQLTHVELDNNQMTGTIPSEFGNLSNLTLLFLWHNKLEGNIPSSLSNCPNLEAVDLSQNALTGPIPKGIFELKNLNKLLLLSNNLSGNIPSEIGNCSSLVRFRASNNKITGSIPPQIGNLRHLNFLDLASNRISGVIPEEISGSRNLTFLDLHSNMIAGSLPASLSQLVSLQFIDVSDNMIEGTLSPRLGSLGSLTKLVLGKNHISGSIPSQLGSCAKLQLLDLSSNNLTGNIPGSIGNIPALEIALNLSWNQLSGEIPQQFSALVKLGILDISHNELTGNLQYLAGLQNLVVLNISYNKFSGRVPNTPFFAKLPLSMLAGNPSLCFSGNQCAGDDSGSRLGRRAKTARIAMVVLLCTACALLLAALYVVVAAKRRRRGQGSDHDLDGSDSDVEIGPPWEVTLYQKLDLSISDVAKCLTAGNVIGRGRSGVVYKVNMPAGIDVAVKRLRSSEKFSAAAFSSETATLARIRHRNIVRLLGWAGNRWTKLLFYDYLPNGNLDTLLHEGCTELIEWETRFKIALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDTYEPCLADFGFARLVEDDHGSFSLNPQFAGSYGYIAPEYGCMLKITEKSDVYSYGVVLLEIITGKRPADASFAEGQHVIEWVREHLKKKKDPVDIVDPKLQGLPDTHIQEMLQALGISLLCTSTRPDDRPTMKDVAALLREIRHDPPLGLEAHKPNPVPTTTNSSSSSVTPAQWLLLHPSSHSSSLNYSSSTVP 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0743 1104 Gene3D Ribonuclease Inhibitor 199 445 IPR032675 -
Dere03g0743 1104 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 424 - -
Dere03g0743 1104 SMART serkin_6 776 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0743 1104 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 852 1065 - -
Dere03g0743 1104 FunFam Putative LRR receptor-like serine/threonine-protein kinase 605 689 - -
Dere03g0743 1104 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 425 519 - -
Dere03g0743 1104 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Dere03g0743 1104 SUPERFAMILY Protein kinase-like (PK-like) 764 1051 IPR011009 -
Dere03g0743 1104 Gene3D Phosphorylase Kinase; domain 1 760 851 - -
Dere03g0743 1104 Gene3D Ribonuclease Inhibitor 446 691 IPR032675 -
Dere03g0743 1104 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 520 604 - -
Dere03g0743 1104 SUPERFAMILY RNI-like 326 665 - -
Dere03g0743 1104 ProSiteProfiles Leucine-rich repeat profile. 119 142 IPR001611 GO:0005515
Dere03g0743 1104 MobiDBLite consensus disorder prediction 1066 1083 - -
Dere03g0743 1104 ProSiteProfiles Protein kinase domain profile. 776 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0743 1104 Gene3D Transferase(Phosphotransferase) domain 1 852 1058 - -
Dere03g0743 1104 MobiDBLite consensus disorder prediction 1056 1083 - -
Dere03g0743 1104 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 27 200 - -
Dere03g0743 1104 SMART LRR_typ_2 503 526 IPR003591 -
Dere03g0743 1104 SMART LRR_typ_2 286 310 IPR003591 -
Dere03g0743 1104 SMART LRR_typ_2 478 502 IPR003591 -
Dere03g0743 1104 SMART LRR_typ_2 550 574 IPR003591 -
Dere03g0743 1104 SMART LRR_typ_2 117 139 IPR003591 -
Dere03g0743 1104 SMART LRR_typ_2 382 406 IPR003591 -
Dere03g0743 1104 SMART LRR_typ_2 165 189 IPR003591 -
Dere03g0743 1104 SMART LRR_typ_2 334 358 IPR003591 -
Dere03g0743 1104 SMART LRR_typ_2 141 164 IPR003591 -
Dere03g0743 1104 Pfam Leucine rich repeat 312 370 IPR001611 GO:0005515
Dere03g0743 1104 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Dere03g0743 1104 Pfam Leucine rich repeat 479 539 IPR001611 GO:0005515
Dere03g0743 1104 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Dere03g0743 1104 Pfam Protein kinase domain 779 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0743 1104 SMART LRR_sd22_2 141 167 - -
Dere03g0743 1104 SMART LRR_sd22_2 526 541 - -
Dere03g0743 1104 SMART LRR_sd22_2 382 408 - -
Dere03g0743 1104 SMART LRR_sd22_2 623 648 - -
Dere03g0743 1104 SMART LRR_sd22_2 478 501 - -
Dere03g0743 1104 SMART LRR_sd22_2 334 360 - -
Dere03g0743 1104 SMART LRR_sd22_2 117 140 - -
Dere03g0743 1104 SMART LRR_sd22_2 262 288 - -
Dere03g0743 1104 ProSitePatterns Protein kinases ATP-binding region signature. 782 804 IPR017441 GO:0005524
Dere03g0743 1104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Dere03g0743 1104 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Dere03g0743 1104 SUPERFAMILY RNI-like 75 396 - -
Dere03g0743 1104 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 517 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0743 Dere-ChrDere03 11887300 11891624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0743 26 1054 Receptor kinase-like Gene Family AT5G56040 54.528 0.0 1089
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere03g0743 Pkinase 1.6e-39 CL0016