Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0722 ATGGGTCGCCATTCCTGTTGTGTAAAGCAAAAGCTGAGGAAGGGATTGCAGCGATGTGGAAAGAGTTGCAGACTGAGGTGGATTAATTATCTGAGGCCGGACTTGAAGAGAGGCATGTTTTCCCAGCAAGAGGAGGATCTCATAATCAGTCTTCATGAAGTTCTTGGCAATAGGTGGGCTCAAATTGCAGCACAGTTACCTGGAAGAACAGATAATGAGATAAAGAACTTCTGGAATTCATGTCTGAAGAAGAAGCTGTTCAAGCAAGGGATTGACCCAACCACACACAAGCCTCTTATCTCTGAACCTCAAACAATAAAGGAGGAGAAGAAAAGTCCATCAGATATAGAGACCCCACTATTTCCTAGTCTGCAGATACCATTTTCAGTTTCTGCTACATCATCAACTTCCATAGGCTTCTCATCATCACAGGGGTCAATATCAGCACTTCTGGGAAGTGATTCGAACCAGTTTGAGAATAATGGTTTCGACCCATTATCCTACTTTGAGTTCCAAATGGGAGGTTACAATCATTCTGGGTATGGATTCAATATCCCTTCTATAATGCCAAGTTTGACCAGTTCTGTGACAGAGTTCTCATCAGATAACAATTCGGCTTCAAGAATCAGTTCGAGCAATAGCTCAAACTATGTTCAAGGAGGAGGAGGGTGTCACATAAGCAGCATGATTGAGAATAATAACAACAATGGAGGAGGCTTACTGATGGATCCAATGTTTCAGTTTCAAATGAATGCCATAAAGAATGAAGAAGATCAAATATTGATGAAGACAGGGTCGTGGCAAGAAGAAGGACAGCTTCTGAATCAAAGTTCCATAGATTTCACCACCACCTATCCGTTAACGTCACTGTCAGAAGATCTAACACCCTCGAATTTTGATGTTTTCCACCATATGTGA 918 0.4183 MGRHSCCVKQKLRKGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLFKQGIDPTTHKPLISEPQTIKEEKKSPSDIETPLFPSLQIPFSVSATSSTSIGFSSSQGSISALLGSDSNQFENNGFDPLSYFEFQMGGYNHSGYGFNIPSIMPSLTSSVTEFSSDNNSASRISSSNSSNYVQGGGGCHISSMIENNNNNGGGLLMDPMFQFQMNAIKNEEDQILMKTGSWQEEGQLLNQSSIDFTTTYPLTSLSEDLTPSNFDVFHHM 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0722 305 PANTHER MYB DOMAIN PROTEIN 55 15 232 - -
Dere03g0722 305 CDD SANT 40 79 IPR001005 -
Dere03g0722 305 FunFam Transcription factor MYB86 39 109 - -
Dere03g0722 305 Gene3D - 38 115 - -
Dere03g0722 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 86 IPR017930 -
Dere03g0722 305 ProSiteProfiles Myb-like domain profile. 32 82 IPR001005 -
Dere03g0722 305 SMART sant 36 84 IPR001005 -
Dere03g0722 305 Gene3D - 6 36 - -
Dere03g0722 305 Pfam Myb-like DNA-binding domain 37 81 IPR001005 -
Dere03g0722 305 SUPERFAMILY Homeodomain-like 17 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0722 Dere-ChrDere03 11585351 11586546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0722 1 115 MYB Transcription Factor Family AT4G01680 62.069 1.73e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere03g0722 Myb_DNA-binding 8.9e-13 CL0123