Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0712 ATGGGAACGCCGTTGTTCATTTTCATTTTCTTCTTCTTCTTCTTCCTCCTCTTCCTCTCTCCTATCTCTGCTGTTGACTTCCTGTTCAATTCCTTCAACAGCGTCATCAATGGCACCAACGTTACTCTCATCAACGACGCCCGCGTGGATAACTCCGTCATTCGCATGACTAACGACTCCAATCAGTACTCCTTCGGACGATCCTTCTACCCCACCACTATCTCCATGAAACCCACCTCTAACTCCTCCAACATTTCCTCCTTCTCCACTTCCTTCGTCTTCTCCATCTTGCCCCAGATCTCCACCAGCCCGGGATTCGGTCTCGCCTTCGTCCTCTCCAACACCATGTCCCCTCCCGGCGCCCTCGCCAGCCAGTACTTCGGTCTCTTCACAAACGCCACCTATCCCACCGTCGCTCCCCTGCTCGCCGTCGAATTCGATACCGGACAGAACCCGGAGTTCAACGACCCAGATGACAACCACATCGGGATCGATTTGAACAACATCGAATCCATAATCACAAGAACTGCTGGGTACTATAATTCCACGGGTGGTTTCGTGCCCATCCGAATGCGCAATGGTGAGAACGTCCGAGCTTGGGTAGACTTCGATGGCGCAAATTTGGAGATAAATGTTACGGTTGCGCCGATCGGCGTTCCTCGCCCATCTATGCCGACGCTTTCCTATAAAGATCCCCTTATAGCTAATTACGTGTCTGCAGAGATGTATGTTGGATTTTCGGCATCGAAGACGAATTGGGTTGAAGCACAAAGACTTCTAGCTTGGAGCTTCAGTGATACTGGACCTGCGAGAGAGATCAATACAGCAAATTTGCCAGTTTTTCGGTTGGAATCGTCGTCTTCGAAGCTATCTGATGGGGCAATTACTGGGATTGTGATAGGATGTCTTGCTTTTGTGGTAATTTGTGCTTCTGGGTATTACCTGTGGTGGCGAAACAACAAATTGAAAGACCAAGAGGATGAAATTGAAGATTGGGAGCTAGAGTACTGGCCACACAGATTCTCCTACGAGGACCTAAGCGTGGCTACTGGTGAATTCCGCAAGGACAATCTCTTAGGCACAGGAGGATTCGGAAGAGTTTACAAAGGAACACTATCGAACAACACAGAAATTGCAGTCAAATGCGTCAACCACGATTCCAAACAAGGGTTACGAGAATTCATGGCAGAGATTTCCAGCATGGGCAGGCTTCAACACAAGAACTTGGTTCAAATGAGAGGATGGTGCAGAAAAGGGAACGAACTCATGCTTGTATACGACTACATGCCCAATGGAAGTCTGAACAGATGGATTTTCGACAATCCCACGAAGCTTCTAGGTTGGGAACAACGTCGCCGAATCCTCATCGACGTCGCAGAGGGCCTGAACTATCTCCACCATGGTTGGGATCAAGTGGTGATTCACAGAGACATCAAATCAAGCAACATATTACTAGATTCGGATATGAGAGGTAGATTGGGAGATTTTGGTCTCGCTAAGCTTTACCAACATGGTGAAGTTCCCAACACGACGAGGGTGGTGGGTACGTTGGGGTACTTGGCGCCTGAGCTGGCGACGGTGGCTGCGCCGACGTCGGCGAGCGACGTGTACAGCTTCGGAGTGGTGTTGTTAGAGGTTGCGTGTGGGCGGAGACCCATAGAGACGTCGGCGCCGGAGGAGGAGGTGGTGCTGATTGATTGGGTGAGGGATTTGTACGCCAAAGGGAGTGCCGGCGAGGCGGCGGATCCTAGAATTAAGGGTGAGTACCATGAGGCAAACATGGAACTGGTGTTGAAGCTTGGTCTGGCTTGCTGTCACCCTGATCCGCAGAGGCGACCAAACATGAAGGAGGTGGTCGTACTGTTAGTGGGCGAGGAAGTCGCTGCTGCGCCGGCAGAGCTGTTGTCTGAATTAGCTCGCGGAGACAGCGGCACCGTGGACGGTGGCGGCGACGGCGAAGCACAAGAGGCGGCGCCATACAGAACCACGCATGCGGTATGA 2001 0.5147 MGTPLFIFIFFFFFFLLFLSPISAVDFLFNSFNSVINGTNVTLINDARVDNSVIRMTNDSNQYSFGRSFYPTTISMKPTSNSSNISSFSTSFVFSILPQISTSPGFGLAFVLSNTMSPPGALASQYFGLFTNATYPTVAPLLAVEFDTGQNPEFNDPDDNHIGIDLNNIESIITRTAGYYNSTGGFVPIRMRNGENVRAWVDFDGANLEINVTVAPIGVPRPSMPTLSYKDPLIANYVSAEMYVGFSASKTNWVEAQRLLAWSFSDTGPAREINTANLPVFRLESSSSKLSDGAITGIVIGCLAFVVICASGYYLWWRNNKLKDQEDEIEDWELEYWPHRFSYEDLSVATGEFRKDNLLGTGGFGRVYKGTLSNNTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWIFDNPTKLLGWEQRRRILIDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSDMRGRLGDFGLAKLYQHGEVPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETSAPEEEVVLIDWVRDLYAKGSAGEAADPRIKGEYHEANMELVLKLGLACCHPDPQRRPNMKEVVVLLVGEEVAAAPAELLSELARGDSGTVDGGGDGEAQEAAPYRTTHAV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0712 666 Gene3D Transferase(Phosphotransferase) domain 1 429 630 - -
Dere03g0712 666 CDD STKc_IRAK 359 616 - -
Dere03g0712 666 Gene3D Phosphorylase Kinase; domain 1 316 428 - -
Dere03g0712 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Dere03g0712 666 ProSiteProfiles Protein kinase domain profile. 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0712 666 Pfam Legume lectin domain 25 278 IPR001220 GO:0030246
Dere03g0712 666 MobiDBLite consensus disorder prediction 640 666 - -
Dere03g0712 666 CDD lectin_legume_LecRK_Arcelin_ConA 25 268 IPR001220 GO:0030246
Dere03g0712 666 FunFam L-type lectin-domain containing receptor kinase S.1 338 428 - -
Dere03g0712 666 SMART serkin_6 353 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0712 666 FunFam L-type lectin-domain containing receptor kinase S.4 23 272 - -
Dere03g0712 666 Gene3D - 23 287 - -
Dere03g0712 666 Pfam Protein kinase domain 354 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0712 666 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
Dere03g0712 666 PANTHER - 45 625 - -
Dere03g0712 666 SUPERFAMILY Protein kinase-like (PK-like) 328 622 IPR011009 -
Dere03g0712 666 FunFam L-type lectin-domain containing receptor kinase S.4 429 634 - -
Dere03g0712 666 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Dere03g0712 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 281 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0712 Dere-ChrDere03 11430307 11432307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0712 23 624 Receptor kinase-like Gene Family AT1G15530 71.122 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere03g0712 Pkinase 7.6e-51 CL0016