Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0711 ATGCCCTCCACCACCACTTCCCGAAGTTTTCAAGTTCCAACTCCAAACCCTTCTCCTTCTTCTCTCTCTCTGCTCGAAGTTGGAACTTTACCATTTTACCCTCTTCTTCCAAACCCTCACTCTTACAAAGTAATTCAGCGATTCATGGACTCCAAACACAGAACCACACTTAAATTCCTCTGTAGCTACGGGGGCAAGATTCTTCCCCGTTCCACCGACGGCAAGCTCCGTTACGTCGGCGGCCACACCAGAGTCCTCGCCGTTGATCCTTCTATTTCTTGTTCAGAGCTGATGGTAAAGCTTGGAGAGTTCTGTGGTTCGTCTGTGACCTTGAAGTGTTCATTGCCCAACGGAGACCTCGAGACGTTGATTTCTATTACCTGCGATGAGGATTTGGCCAATATAATCGAGGAATACAATCGAGCTTCGTCGTCTTTGGCTCATCCGTTAAAGATCAGGGCCATTCTTTCGCCGCCGAAGTCTCTGAAGAAAGTATCTCCTCCTCCGTCTAAGCCGTCGAGCGCCGACCACTCTCCGGCTAGATCCGCCCACTCGTCCACTGAATCGTTCCCGTATTCCCCGGCGCATCGCTTTGTCCGCCCAGTTGCGTATCCCGTTGGAGTCCGTAACGGCTCGGGAAAAGCGTGTTGCTATACCGGCCAAAGCAACGGAAGCCCTAGATTCTTGTATTGTGGGCCCCGCTGCAACAATTTCTGCCACTAA 723 0.5145 MPSTTTSRSFQVPTPNPSPSSLSLLEVGTLPFYPLLPNPHSYKVIQRFMDSKHRTTLKFLCSYGGKILPRSTDGKLRYVGGHTRVLAVDPSISCSELMVKLGEFCGSSVTLKCSLPNGDLETLISITCDEDLANIIEEYNRASSSLAHPLKIRAILSPPKSLKKVSPPPSKPSSADHSPARSAHSSTESFPYSPAHRFVRPVAYPVGVRNGSGKACCYTGQSNGSPRFLYCGPRCNNFCH 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0711 240 MobiDBLite consensus disorder prediction 160 190 - -
Dere03g0711 240 MobiDBLite consensus disorder prediction 1 20 - -
Dere03g0711 240 SMART PB1_new 71 159 IPR000270 GO:0005515
Dere03g0711 240 Pfam PB1 domain 72 143 IPR000270 GO:0005515
Dere03g0711 240 SUPERFAMILY CAD & PB1 domains 73 165 - -
Dere03g0711 240 CDD PB1_UP2 60 156 - -
Dere03g0711 240 Gene3D - 75 155 - -
Dere03g0711 240 PANTHER OS05G0427100 PROTEIN-RELATED 37 182 - -
Dere03g0711 240 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0711 Dere-ChrDere03 11414989 11415815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0711 56 158 MAP Kinase Kinase Kinase AT1G04700 46.602 4.14e-24 99.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0711 03 11414989 11415815 Dere14g0628 14 6643910 6644568 CCT
Dere03g0711 03 11414989 11415815 Dere03g0711 03 11414989 11415815 ECH