Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0700 ATGCCGCAGGATTCCTCCGAGCAAGAGCTAGACGATCCTGATTCCGAGTTCGTGGAGATTGACCCCACGGGTCGATATGGTCGGTACAAGGAAGTTTTAGGGAAGGGGGCTTTCAAGAAGGTATATAGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCTTGGAATCAGGTTAAGGTAGCAGATCTATTGCGTAACAATGAAGATTTGGAGCGCCTATATTCAGAAGTCCATTTGCTGCAGACTTTGAAGCATAAAAACATAATTAAATTTTACAATTCATGGATTGACGCAAAGCATGAGAACATTAACTTCATCACTGAAATATTCACCTCAGGAACATTACGCCAATATCGCAAAAAACATAAGCATGTTGACTTGAGAGCACTGAAGAAATGGTCGAGGCAGATTTTGGAGGGCCTTAGTTATCTTCACAGTCATGATCCGCCAGTTATTCATCGAGATTTAAAGTGTGACAACATTTTTGTCAATGGAAATCATGGCGAGGTTAAAATTGGTGACTTAGGATTGGCTGCCATTTTACAGCAGGCCAATTCAGCTCACAGTGTTATAGGTACTCCGGAGTTTATGGCTCCTGAGCTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATGCTTTTGGGATGTGCTTGCTGGAGTTGGTGACCGTCGAGTATCCCTATGTTGAATGTGCTAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCATTGGCAAAGGTGACAGACCCTGGAGTTAAGGCATTTATAGAGAAGTGTATTGCAAATGTTTCTGAGCGGTTGCCTGCGAAGGAACTTTTAATGGATCCCTTTCTTCTGCCAGATGATGAAAGTGACAGTGTAGGTCGTTCTTTAAGGCCCCAAACCGATGATATAGAAACTTCTGCCGAGACAGGTAGGGAATTTAAAGTGGAAGGTCAAAGGAGAGATGTCAATACCATATTTCTGAAACTGCGAATAGCAGATTCATCAGGTAATATTCGCAACATACACTTCCCCTTTGATATTGAGGCCGACACTGCAATTGCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTCACAGATCAAGATGTTACAACTATTGCTGAGATGATTGACTCAGAAATTCGATATCTCATTCCTGACTGGAATCCTGATGCAAGTCCTCCCGCCCATAGCTCTGGTCAAGAATTACCAGTATCGGGTGGCCATACCTCTGAAACTAGGGACGAGGCTTCTCCACAGGGAAATAGTTCTACGGCCTCTACTGGTAGTCTTTCACTGGAAAGATTACCTTCTGGTCGTAACTACTGGTCTGACTCACCCAGGCCAGGTAGAACCTCTCCATTAGGGCCTGGCTCTTCAAAGTTATCTTGTGAAGGAGATTTGAAAACTGAGGAAGGAGGCTCAATTGCAAACGGTGCTACTTCAGTTGAGCAGCAGGTTGGCAACTGCATTTGCGAGGATGATGATAAGAGTGTAGAGAAGGAATCTAGTGTGACTGCTGATTCCCCTTCCAGTGAGAGAATTATTACATGTGAGGATTTACATGCGACCGACGGAGAATCTCCACAGGTTGAAGGTCCTATAAAATGGAAAGATGCTGGGACAGAAGATGTCAACATAATTGCTGCAAAACTAGAGAAATTGTTGGTAGAACAACGAGAGGAGTTAGATGAACTGAAGAGGAAGCATGAATTAGCTGTCTCAGATCTTCTGAAGGAACTTCCTCCAGAAATACAACATAAGGTCCTAATTATTTGCAACCTGGAGATATCTGACAGTGGAAATGTGCAGTAA 1821 0.4311 MPQDSSEQELDDPDSEFVEIDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNNEDLERLYSEVHLLQTLKHKNIIKFYNSWIDAKHENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVTDPGVKAFIEKCIANVSERLPAKELLMDPFLLPDDESDSVGRSLRPQTDDIETSAETGREFKVEGQRRDVNTIFLKLRIADSSGNIRNIHFPFDIEADTAIAVASEMVEELELTDQDVTTIAEMIDSEIRYLIPDWNPDASPPAHSSGQELPVSGGHTSETRDEASPQGNSSTASTGSLSLERLPSGRNYWSDSPRPGRTSPLGPGSSKLSCEGDLKTEEGGSIANGATSVEQQVGNCICEDDDKSVEKESSVTADSPSSERIITCEDLHATDGESPQVEGPIKWKDAGTEDVNIIAAKLEKLLVEQREELDELKRKHELAVSDLLKELPPEIQHKVLIICNLEISDSGNVQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0700 606 MobiDBLite consensus disorder prediction 390 483 - -
Dere03g0700 606 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 329 383 IPR024678 GO:0004674|GO:0005524
Dere03g0700 606 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Dere03g0700 606 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Dere03g0700 606 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0700 606 Coils Coil 551 582 - -
Dere03g0700 606 MobiDBLite consensus disorder prediction 1 21 - -
Dere03g0700 606 CDD STKc_WNK 25 285 - -
Dere03g0700 606 MobiDBLite consensus disorder prediction 291 312 - -
Dere03g0700 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Dere03g0700 606 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Dere03g0700 606 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Dere03g0700 606 Gene3D - 325 396 - -
Dere03g0700 606 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 584 - -
Dere03g0700 606 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0700 606 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0700 606 MobiDBLite consensus disorder prediction 1 17 - -
Dere03g0700 606 FunFam Probable serine/threonine-protein kinase WNK3 325 420 - -
Dere03g0700 606 MobiDBLite consensus disorder prediction 396 441 - -
Dere03g0700 606 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0700 Dere-ChrDere03 11299358 11302835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0700 17 401 MAP Kinase Kinase Kinase AT3G51630 57.357 4.48e-163 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere03g0700 Pkinase 5.4e-51 CL0016