Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere03g0689 | ATGGCTCCAAAGAAGGACAAGGCTCCTCCACCTTCCTCGAAACCCGTTAAGTCTGGTGATGGCAAGCAAAAGGAGAAGGCTAACAACATGGGGCCGTTTGATCAGGCCACTTATGACAAGCTATTATCTGAAGCACCAAAATACAAGCTTACTCATGGGAAACAAGAGGAATGCAATTGCGTTGTGTTTCTTTCTATCAAGCATATTGCTTTCGCTAGTCTCTTGTGA | 228 | 0.4474 | MAPKKDKAPPPSSKPVKSGDGKQKEKANNMGPFDQATYDKLLSEAPKYKLTHGKQEECNCVVFLSIKHIAFASLL | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere03g0689 | 75 | PANTHER | 40S RIBOSOMAL PROTEIN S25 | 1 | 50 | IPR004977 | - | |
| Dere03g0689 | 75 | Gene3D | - | 13 | 52 | - | - | |
| Dere03g0689 | 75 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Dere03g0689 | 75 | Pfam | S25 ribosomal protein | 13 | 50 | IPR004977 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere03g0689 | Dere-ChrDere03 | 11131380 | 11131715 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere03g0689 | 1 | 50 | Cytoplasmic Ribosomal Protein Gene Family | AT4G34555 | 71.667 | 3.46e-16 | 65.5 |