Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0658 ATGGGAAAAGCAATTCGATGGGTTTGGGCTTTGTCTAATGGGCCGAATCAGTTAAATTTGGGCTTGTGTGACCTGTGTGCCTATTTTCTTTGTACTGGGCCAGGGCTGTGGGACTCCAACACCCGTATTATATCGTGTGCCCTAATTGCGTCTGGCTTCTTCAGGAGCTTCCTCTTTTGGATCTTCTGTTTTGGTGCTTCTTCGTGGTGGGCGTTATTTGTGTTCGACTCGGAGTGGTCCGATTTGGAAATCCGGTCGCTTCTCCTGTCTTGGCTCGAGATCCAGGCCAAGCACAGAAGAATCCGATTCAGATTTGCATTTGATAATCTTCAACCCCTTGCAGACAGTAAATGGTTGTTTGGGGCTTGGCAATTCCTTTTCCTACAAATGGCATCAAGCGAGGGATTTCTCACAGATGAGCAGAGGGAAATGCTAAAAGTTGCTAGCCATAATTTGGAAATTTTATCTTCATCTCCAAAATCTCCCACATCGTTGGCTGCTGAACATCATATAAAAGCACCTGCTGGTAGTAAGGCACAAACTGCTGGGATTGCTGTGAGGCATGTGCGACGATCACACTCTGGAAAGGTTGTGCGCGTGAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAAGAAAGACCCTAATTATGACAGTGGTGAGGAACCCTATCAGCTGGTTGGGTCTACTGTGACTGACCCCTTAGATGAATTCAAGAAGGCAGTTGTATCCACCATTGAGGAATATTTCAGCACGGGTGATGTGGAATTGGCTACCTCTGATCTCAGAGAACTTGGTTCAAGTGAATATTATCCATACTTCATCAAGCGCCTTGTGTCTATGGCCATGGATAGGCATGATAAGGAGAAAGAAATGGCTTCCGTTCTGCTTTCAGCATTGTATGCTGATGTAATCAGTCCTGCACAGATTAGGGATGGATTTTTTATGCTGCTTGAATCTGCTGATGATCTTGCAGTTGACATACTGGATGCAGTTGACATCCTTGCTTTATTTCTGGCTCGTGCTGTTGTTGATGACATCCTTCCTCCAGCCTTTCTCGCCAGGGCAAACAAGGCACTTCCTGCATCTTCCAAGGGGGCTCAGGTTATCCAGACTGCTGAGAAGAGTTATCTCTCAGCGCCACATCATGCAGAGCTTGTGGAGAGGCGGTGGGGTGGTAGCACTCATGTCACTGTTGAAGAAGTGAAGAAGAAGATTGCTGATTTGTTAAGAGAATATGTTGAAAGTGGTGACACAGTCGAAGCCTGTCGTTGTATTCGGGAGTTGGGGGTTTCATTCTTTCATCACGAGGTTGTGAAGAGGGCTCTGATACTTGCCATGGAGATACGGTCAGCAGAATCTTTAATGTTGAAGTTATTAAAAGAAGCTGCAGAAGAAGGACTCATCAGTTCCAGCCAAATGGTGAAAGGTTTTTCTCGTTTGGCAGAAGGCCTGGATGATCTTGCTCTTGATATTCCATCGGCTAAAACCTTGTTTCAATCATTTTTCCCTAAGGCAATATCTGAAGGATGGCTTGATGCTTCATTTATGAAACCCTCTGGTGAAGATGGGGATATCCAAGTTGAAGATGAAAAGGTTAGGAAGTACAAACAAGAGGCAGTAACGATAATTCATGAGTATTTTCTCTCTGATGATATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGGGGCACCTGAGTATAACCCAATATTTTTGAAGAAGCTTATTACTCTTGCTATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTTTTATCTGCTCTTCATATAGAGATATTCTCGACAGAGGATATAGTTAATGGTTTTGTCATGCTTCTCGAAAGTGCTGAAGATACAGCACTGGATATATTGGATGCTTCAAATGAGCTTGCACTTTTCTTAGCTCGGGCTGTGATCGACGATGTATTGGCCCCTCTGAATCTAGAGGAAATTGGCGGCAGGTTGCCACCAAAATGCAGTGGGAGTGAAACTGTGCGTATGGCTCGATCACTCATTGCTGCTCGTCATGCTGGTGAGAGGCTATTGAGATGTTGGGGTGGTGGGACTGGATGGGCTGTGGAGGATGCTAAGGACAAGATCATGAAGCTCTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAAGCATGCCAGTGTATTCGTGACCTTGGAATGCCTTTCTTTAACCATGAGGTAGTTAAGAAAGCTTTGGTCATGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAATGCTTCAGTGAAGGTCTGATCACCATCAATCAGATGACTAAAGGGTTCACCCGCATCAAGGATGGTCTTGATGATCTGGCTCTGGACATTCCAAATGCACAGGAAAAATTTGGCTTCTATGTGGAGCATGCGCTGAAGAAGGGTTGGCTTCTACCATCGTTTGATTCCTCAGATGTTTGA 2490 0.4506 MGKAIRWVWALSNGPNQLNLGLCDLCAYFLCTGPGLWDSNTRIISCALIASGFFRSFLFWIFCFGASSWWALFVFDSEWSDLEIRSLLLSWLEIQAKHRRIRFRFAFDNLQPLADSKWLFGAWQFLFLQMASSEGFLTDEQREMLKVASHNLEILSSSPKSPTSLAAEHHIKAPAGSKAQTAGIAVRHVRRSHSGKVVRVKKDGAGGKGTWGKLLDTDGESHIDKKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSTIEEYFSTGDVELATSDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARANKALPASSKGAQVIQTAEKSYLSAPHHAELVERRWGGSTHVTVEEVKKKIADLLREYVESGDTVEACRCIRELGVSFFHHEVVKRALILAMEIRSAESLMLKLLKEAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSFFPKAISEGWLDASFMKPSGEDGDIQVEDEKVRKYKQEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGGRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAQEKFGFYVEHALKKGWLLPSFDSSDV 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0658 829 Gene3D - 401 533 - -
Dere03g0658 829 Gene3D - 699 826 - -
Dere03g0658 829 ProSiteProfiles MI domain profile. 250 371 IPR003891 -
Dere03g0658 829 ProSiteProfiles MI domain profile. 414 535 IPR003891 -
Dere03g0658 829 FunFam Programmed cell death protein 4 400 535 - -
Dere03g0658 829 SUPERFAMILY ARM repeat 708 824 IPR016024 -
Dere03g0658 829 SUPERFAMILY ARM repeat 248 408 IPR016024 -
Dere03g0658 829 PANTHER PROGRAMMED CELL DEATH 4 132 825 IPR039778 GO:0045892
Dere03g0658 829 Gene3D - 540 691 - -
Dere03g0658 829 Gene3D - 243 391 - -
Dere03g0658 829 FunFam programmed cell death protein 4 242 393 - -
Dere03g0658 829 SUPERFAMILY ARM repeat 411 531 IPR016024 -
Dere03g0658 829 FunFam programmed cell death protein 4 538 692 - -
Dere03g0658 829 ProSiteProfiles MI domain profile. 711 829 IPR003891 -
Dere03g0658 829 ProSiteProfiles MI domain profile. 548 669 IPR003891 -
Dere03g0658 829 SUPERFAMILY ARM repeat 546 704 IPR016024 -
Dere03g0658 829 SMART ma3_7 251 362 IPR003891 -
Dere03g0658 829 SMART ma3_7 712 821 IPR003891 -
Dere03g0658 829 SMART ma3_7 415 526 IPR003891 -
Dere03g0658 829 SMART ma3_7 549 660 IPR003891 -
Dere03g0658 829 Pfam MA3 domain 713 820 IPR003891 -
Dere03g0658 829 Pfam MA3 domain 550 659 IPR003891 -
Dere03g0658 829 Pfam MA3 domain 251 362 IPR003891 -
Dere03g0658 829 Pfam MA3 domain 415 526 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0658 Dere-ChrDere03 10770754 10777033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0658 704 811 Eukaryotic Initiation Factors Gene Family AT5G57870 31.532 1.13e-09 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0658 03 10770754 10777033 Dere03g0658 03 10770754 10777033 ECH