Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0640 ATGGTTCCTCCTCTTTATAGTGCCCTAAGTGATAATGATGATCATATTCCCATAACAGGCCTTGGCTTCCATATTTCCTCCATGGGTTCCTTTGCCTATCCTCATTTTCTTCCTGTTTTGGAAACCAGAGCATCTTCTTCTCCTTGGACCCTTCGTTTTTCTGATGAAACTAATGGAAATAGTAACAAAAGGATAAAGAGAATCACAAGCATCCCAGAAGTCCTTGGAGACTATAAAGGCCATTCAAGCATTGGAATTAGCGATTGCTATAGCAGTCTAAGCAGAGGCAACAGTGTGAATAGCCTTCCAAAGCTCCATTTCAGAGACCACATATGGACTTATACACAGAGATATCTTGCCTCTGAAGAGACAGCACAACATGACATGATCAATTCTGAGGTATGTGAAGCTGAAGAACAAGAAGATGGGAATCGTGCTGATGGGATGAGGCTTGTTCAGCTTCTTATTGCTTGTGCTGAAGGCGTGGCCTGTCGTGACAAATCACATGCTTCCATTTTACTATCTGAACTAAGATCAAATGCTTTGGTCTTTGGCTCTTCCTTCCAGCGAGTGGCTTCTTGTTTCGTCCAAGGCCTAGCTGATCGGCTCGCGATGGTTCAACCAGTTGGAGCTGTGGGAAATATGGAACCCATGATGAACATTATGGACTTAGCCTCGGAACAAATGGAAGAAGCCTTTAAATTGGTTTATGAGATTTGCCCACACATTAAGTTTGGTCACTTTGTAGCTAACACCACAATATTGGAAGCCTTTGAAAATCACAGTTTTCTTCATGTGCTGGATCTTGGGATAAGTCTTGGTCTTCCACATGGCCATCAATGGAGGGGATTGATCCAGAGCCTAGCTAACCGCTCAGGCCAACCTGTTCGCCGCCTTCGAATTACTGGGGTTGGCCTTTGTGTTGAGAAACTTCGATTGATTGGTGAAGAACTTGAAGTTTATGCTAATAACTTGGGGATTAACCTGGAGTTCTCAGTGGTGGAAAAGAACTTGGAAAATTTGCATACCGATGACGTTAAAGTGAATGAAGAGGAGGTTCTGGTGGTTAATAGCATTCTTCAGTTGCATTGTGTGGTGAAAGAGAGTCGTGGGGCTTTAAACTCAGTGCTTCAGATGATTCATAAGCTTTCACCAAAAGTGTTGGTTATGGTTGAGCAGGACTCGAGCCACAATGGACCCTTTTTCCTTGGGAGGTTCATGGAAGCACTTCACTATTACTCTGCTATTTTTGACTCTTTGGATGCTATGTTGCCAAAGTATGACACTAAGAGAGCAAAAATAGAACAGTTCTATTTTGCTGAGGAGATCAAGAACATTGTGAGCTGCGAGGGACCGGCAAGGGTGGAGAGGCATGAGAGGGTGGACCAGTGGCGAAGGAGGATGAGCCGGGCTGGGTTTCAGGGTGTACCTTTGAAGATGGTAACTCAGGCCAAGCAGTGGCTTCAGAAGAATCAGGTTTGTGATGGCTATACCGTTGTGGAGGAGAAAGGGTGCTTGGTGCTTGGGTGGAAATCAAAGCCAATTGTGGCAGCTTCTTGCTGGAAATGCTGA 1572 0.4466 MVPPLYSALSDNDDHIPITGLGFHISSMGSFAYPHFLPVLETRASSSPWTLRFSDETNGNSNKRIKRITSIPEVLGDYKGHSSIGISDCYSSLSRGNSVNSLPKLHFRDHIWTYTQRYLASEETAQHDMINSEVCEAEEQEDGNRADGMRLVQLLIACAEGVACRDKSHASILLSELRSNALVFGSSFQRVASCFVQGLADRLAMVQPVGAVGNMEPMMNIMDLASEQMEEAFKLVYEICPHIKFGHFVANTTILEAFENHSFLHVLDLGISLGLPHGHQWRGLIQSLANRSGQPVRRLRITGVGLCVEKLRLIGEELEVYANNLGINLEFSVVEKNLENLHTDDVKVNEEEVLVVNSILQLHCVVKESRGALNSVLQMIHKLSPKVLVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQGVPLKMVTQAKQWLQKNQVCDGYTVVEEKGCLVLGWKSKPIVAASCWKC 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0640 523 ProSiteProfiles GRAS family profile. 142 522 IPR005202 -
Dere03g0640 523 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 129 517 IPR005202 -
Dere03g0640 523 Pfam GRAS domain family 151 522 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0640 Dere-ChrDere03 10528795 10530366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0640 148 523 GRAS Transcription Factor Family AT1G66350 36.387 2.29e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere03g0640 GRAS 8.7e-112 CL0063