Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0626 ATGGCGGCAGGGCATGACAATGTTTTGAGGAGAAGAGAATCGTACAAATATAGTTACAATAAGGAATTTGACCGTTATAAGAATGGTTCATCTGTCGTGCGAGTGCATAAGTCTTGCAACCACGACGTCACATATAAGAACGGGCATAGATCTTCAAATTCTCAGTATTCTGGTTCTGGACAGATTACGTTTTATGGTAGAAGAGAAGAGAGAGAGCAGGGTGAGTTTTGTAGAAATAATGGGGAATATGCTCCTGCCTCGGGGATTCAGGAAGGTGATGGTGAAATTGAGGACTGTGAAAAACCTTTGGCTCCACCAGAGAAGAGAAGAAAATTTTCTCCAATTGTATGGGACGTAGCAGAAAAGGAGGTAAGAATCTCTTCAAAAAACAGGATCACACAGGTTACTGCTCTGTCTACCTCTGGTCCATCTCTACCAAGCGCTCTGGGAGCCAATGATTACGGTGATGCTGTTAATCCTGAGTTTCCATCTGATTCCTCTAATGCATTGCCTCATGAACATTTGGGGAATGAGGGCAAAGATGTTGATCAGTCTAAAGAAAACCATGTGCAAAGTTGGAACATCACAATGTCAAGATGGGCATCTGACGATTCTTCTCCAAGTGATATATCTGATGATGATTGCTTGCATGGCAAAGGGATCTCAAGTCCAGAAAGTGGTGAAATCAGACGAGAAAGTTCAGAAGGCAAGGACTCTGGATCATCAGGAAGCAGTGGAGGAGGTCATTATCTGGGCCCTTCAAGTGAAGAAGAAAAAGATTCTGCAAAGGAGTTCCATGTTGTGGACTCTATGGATGTTGATGAGGAATGTAGTGAAACTACTTATGATAGGTATCCTTCATCTGATTCTGAAGATAGTGGTAGTTTAGTCCAGGTGCAGAGAAACATAAACATGCTCCAGAGTTGCAGAAGTGTGTTTGAATTTGAAATGATTAAGAAAATAAATGAAGGAACTTACGGTGTTGTCTATAAAGCTAGGGATAGGAAGACTGGGGCAATAGTGGCATTAAAGAAGGTGAAGATGAACATAGATAGGGATGGCTTTCCATTGTCCGCTTTGAGGGAAATAAATATTCTCTTATCTTTTAATCATCCTTCTGTTGTGGATGTTAAAGAAGTCGTTATGGATGATATGGATGGAGTTTTTATGGTAATGGAGTACATGGAATATGACCTTAAAGGGTTGATGGAGTTGATGAAGCAGCCCCTTAGTATAGGTGAAATAAAATCCTTGATGAGGAAACTTCTTGAGGGTGTCAAGTATCTCCATGACAATTGGGTTCTCCACAGAGACTTGAAGACGTCAAATATTCTATTAAACAAAGAGGGGGAGCTGAAAATTTGTGACTTTGGCTTATCTCGTCTGTATGGAAGTCCACTAAAGCCATATACGCCTGTTGTGGTTACTCTATGGTACAGAGCTCCTGAGCTGCTTTTAGGTGCTAAAGAATACTCAACAGCGATTGACATGTGGTCAGTGGGTTGCGTAATGGCTGAATTAGTTGCCAAGGTGCCTCTGTTTAGGGGTAAATCTGAAGTTGAACAGCTTAATAAGATTTTCCAAACGCTGGGCACACCTAACGAGAAAATTTGGCCAGGATTGTCCAAATTACCTGGATCCAAGGCTAACTTTGTAAAGCAACCGTATAATCTGTTACGGAAGAAGTTCCCTGCTGCATCATTTACTGGATCACCTGTTCTTTCTGAATTGGGTTTTGACTTGTTGAGCAAGCTTCTTACCTACGATCCTGAAAAGAGGATATGTGCAGAAGATGCCCTTCTTCATGATTGGTTCCGTGAGGCCCCTCTTCCGAAATCTGATTTGAGTCTTACTTTTCCTTCACAGCGCACTTAG 1875 0.4176 MAAGHDNVLRRRESYKYSYNKEFDRYKNGSSVVRVHKSCNHDVTYKNGHRSSNSQYSGSGQITFYGRREEREQGEFCRNNGEYAPASGIQEGDGEIEDCEKPLAPPEKRRKFSPIVWDVAEKEVRISSKNRITQVTALSTSGPSLPSALGANDYGDAVNPEFPSDSSNALPHEHLGNEGKDVDQSKENHVQSWNITMSRWASDDSSPSDISDDDCLHGKGISSPESGEIRRESSEGKDSGSSGSSGGGHYLGPSSEEEKDSAKEFHVVDSMDVDEECSETTYDRYPSSDSEDSGSLVQVQRNINMLQSCRSVFEFEMIKKINEGTYGVVYKARDRKTGAIVALKKVKMNIDRDGFPLSALREINILLSFNHPSVVDVKEVVMDDMDGVFMVMEYMEYDLKGLMELMKQPLSIGEIKSLMRKLLEGVKYLHDNWVLHRDLKTSNILLNKEGELKICDFGLSRLYGSPLKPYTPVVVTLWYRAPELLLGAKEYSTAIDMWSVGCVMAELVAKVPLFRGKSEVEQLNKIFQTLGTPNEKIWPGLSKLPGSKANFVKQPYNLLRKKFPAASFTGSPVLSELGFDLLSKLLTYDPEKRICAEDALLHDWFREAPLPKSDLSLTFPSQRT 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0626 624 PANTHER CELL DIVISION PROTEIN KINASE 314 611 - -
Dere03g0626 624 ProSiteProfiles Protein kinase domain profile. 315 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0626 624 Pfam Protein kinase domain 315 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0626 624 MobiDBLite consensus disorder prediction 253 286 - -
Dere03g0626 624 CDD STKc_CDC2L1 309 605 IPR045267 GO:0004674|GO:0005524|GO:0006468
Dere03g0626 624 FunFam cyclin-dependent kinase G-2 isoform X1 300 396 - -
Dere03g0626 624 MobiDBLite consensus disorder prediction 210 237 - -
Dere03g0626 624 FunFam Cyclin-dependent kinase G-2 397 624 - -
Dere03g0626 624 MobiDBLite consensus disorder prediction 139 295 - -
Dere03g0626 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Dere03g0626 624 SMART serkin_6 315 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0626 624 MobiDBLite consensus disorder prediction 188 205 - -
Dere03g0626 624 SUPERFAMILY Protein kinase-like (PK-like) 310 611 IPR011009 -
Dere03g0626 624 Gene3D Transferase(Phosphotransferase) domain 1 397 616 - -
Dere03g0626 624 Gene3D Phosphorylase Kinase; domain 1 297 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0626 Dere-ChrDere03 10373076 10375403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0626 310 617 Core Cell Cycle Gene Families AT5G10270 46.296 4.33e-85 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Dere03g0626 Pkinase 1.9e-70 CL0016