Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0622 ATGGGGTTCCATAATTTGGTTTTGTTTTTCTGTTTTGCTTGTTGGTGTGTCTTTTCTTTGTGTTCTGCTCAATTGCAATCATCTCAAACCCAAGTGCTTCTTCAGCTAAAAAAGCACCTGGAGTACCCAAAGCAACTGGAAATGTGGAAGGATCGTTGGGCATCTTTTTGCTCTAGTTCTCCTTCTTCACAGGTAAATGTAACATGCGAGGGAAATTTCGTCACTGAGCTAAGCATAATGGGCTATACCGACCCATCAAAGGTTAGAGATTTTGATGGATTTTCTATTCCAAATCAAACATTATCAGAAAACTTCTCTATGGATTCTTTTGTGGCTACTCTTGCGAGGTTAACTAGCTTGAAAGTTCTTCGTCTCGTTTCCTTGGGCATGTGGGGCTCCCTTCCTGATAAAATCCACCGACTATTTGAACTTGAACATTTGGACCTGAGTTCAAACTTTCTATATGGGTCAATTCCTCCCAAGATTTCTACCTTGGTGAATCTTCAAGTTCTTACACTTGATGATAACTTCTTTAACAGTACAGTTCCCACTTGGTTCAATTCTTTGGTTAATTTGACAGTTCTTGGCTTGAGGAATAACAGATTGAAGGGTCAGTTAGGGGATTTTAGTGGTTTAAATGGCTTAGAAGTGCTAGATTGGAGAGAAAACAGATTGGACTCTGTACTACCAAAAATGCCAAAAGGGTTAGTAAGGCTTTATCTGAGCAAAAACTCATTCTCAGGTGAAATTCCCAAGCAGTATGGTCAGCTTAATAGGCTTCAACAGCTTGATATTTCGTTCAATACTCTCACAGGAGAACCTCCTTCTGAGATTTTCTCTTTGCCCAACATCACTTACTTGAATTTGGCATCAAACAAGTTAAGTGGGCCCCTTCAGAATCATCTAAAATGTAGTAACAAACTCAGGTTTGTTGATATTTCATACAACAGATTAATGGGTTTCTTGCCTTCTTGTCTGGGAACAGAGTCAGAAAACAGAGCTGTTAAGTATGAAGGAAATTGCTTATCCTCTATGCTTCAGCATCAGCATACAGGATCATACTGCACAGAAGTTCATGTGAAGAAGAACAAACTCGGAGTTGGAATTTTAGCTGGTGTAATTGTGGGAGTTTTTGTCATAATTGTGGCTTTGGCTTTAGGATTTATTGTTGTGTGTAAAAGGTATTGCTCAAAGGGGATCTCAGAGCAGCGTCTATTGCATAAAGCAGTTCAAGATAGCTCTACTGCAGCAGTAGGGTTCTCCTCTGAGATTGTGGCTAATGCAAGATTAATTTCTCAAGCTTCGAAGTTAGGCAGAGAAGAGCTTCCCATGTGTCGGCCCTATTCTTTCGAAGAGCTTAAGGAAGCTACAAATAACTTCCACAACTCTGCCTTTATGGGTGAAAATTTATATGGGAAGCTTTACAGGGGAAAGCTGCAGAATGGGAAACAAGTTGCTATAAGGAGCATGCCTCTGTCAAAAAAGTATTCATTCAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTGTCTCATTTGGGTCACTGCATTGATGGTGTTGTAGCAGAAAATAATGGCACAAACATCTTCCTCGTATATGAATATGTGCACAATGGGAGTTTTCAGACTTACCTGTCTGGAGCTAGTTCTGGCAAAGTTTTGAATTGGTCAGAGAGATTGACAGTTCTAATTAGTATTGCCAAGGCCGTTCACTTCCTACACACTGGAATGATACCTGGTTTCTTCAAGAACCGACTCAAGACGAACAATATATTGCTTACTGAGCATTGGATTGCAAAGTTGAGTGACTATGGATTGTCCATTATCTCAGAAGAAACTGACACATCTGAGGGAAAAGGAGAACAACCTCGGTCATGGGAAATGAAAAGATTAGAGGATGATGTTTATAGCTTTGGATTCATACTTCTTGAGGCACTTGTTGGACCTTCAGTATCTGCTAAAAGTGAAGCAATTCTGCTGAATGTAATGGCGTCTTTCAACAGTGAAGATGGGTGGAAGCAGATAGTGGACCCCATAGTGCAATCCACGTGCTGTCGCGAATCTTTGTTCATCGTAATTTCCATAACAAACAAATGCCTTTGTCCTGAATCTTGGAGCCGACCATCCATTGAGGATGTCCTTTGGAACTTGCAGTATGCTTCTCAAGTTCAAGCAACATCTGACGCAGATCGAAGACTTGATTCTAAACCTCGTCAGTGA 2241 0.4065 MGFHNLVLFFCFACWCVFSLCSAQLQSSQTQVLLQLKKHLEYPKQLEMWKDRWASFCSSSPSSQVNVTCEGNFVTELSIMGYTDPSKVRDFDGFSIPNQTLSENFSMDSFVATLARLTSLKVLRLVSLGMWGSLPDKIHRLFELEHLDLSSNFLYGSIPPKISTLVNLQVLTLDDNFFNSTVPTWFNSLVNLTVLGLRNNRLKGQLGDFSGLNGLEVLDWRENRLDSVLPKMPKGLVRLYLSKNSFSGEIPKQYGQLNRLQQLDISFNTLTGEPPSEIFSLPNITYLNLASNKLSGPLQNHLKCSNKLRFVDISYNRLMGFLPSCLGTESENRAVKYEGNCLSSMLQHQHTGSYCTEVHVKKNKLGVGILAGVIVGVFVIIVALALGFIVVCKRYCSKGISEQRLLHKAVQDSSTAAVGFSSEIVANARLISQASKLGREELPMCRPYSFEELKEATNNFHNSAFMGENLYGKLYRGKLQNGKQVAIRSMPLSKKYSFRNFKLRLDLLAKLRHPHLVSHLGHCIDGVVAENNGTNIFLVYEYVHNGSFQTYLSGASSGKVLNWSERLTVLISIAKAVHFLHTGMIPGFFKNRLKTNNILLTEHWIAKLSDYGLSIISEETDTSEGKGEQPRSWEMKRLEDDVYSFGFILLEALVGPSVSAKSEAILLNVMASFNSEDGWKQIVDPIVQSTCCRESLFIVISITNKCLCPESWSRPSIEDVLWNLQYASQVQATSDADRRLDSKPRQ 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0622 746 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
Dere03g0622 746 Pfam Leucine rich repeat 167 225 IPR001611 GO:0005515
Dere03g0622 746 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 543 743 - -
Dere03g0622 746 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 236 360 - -
Dere03g0622 746 Pfam Protein tyrosine and serine/threonine kinase 465 659 IPR001245 GO:0004672|GO:0006468
Dere03g0622 746 ProSiteProfiles Protein kinase domain profile. 460 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0622 746 SUPERFAMILY L domain-like 114 352 - -
Dere03g0622 746 Gene3D Ribonuclease Inhibitor 25 234 IPR032675 -
Dere03g0622 746 Gene3D Ribonuclease Inhibitor 235 374 IPR032675 -
Dere03g0622 746 Pfam Leucine Rich Repeat 144 160 IPR001611 GO:0005515
Dere03g0622 746 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 100 725 - -
Dere03g0622 746 Gene3D Phosphorylase Kinase; domain 1 420 542 - -
Dere03g0622 746 Gene3D Transferase(Phosphotransferase) domain 1 543 743 - -
Dere03g0622 746 SUPERFAMILY Protein kinase-like (PK-like) 442 725 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0622 Dere-ChrDere03 10344483 10349837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0622 7 672 Miscellaneous Gene Families AT5G14210 51.209 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Dere03g0622 PK_Tyr_Ser-Thr 3.4e-20 CL0016