Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0614 ATGGACGTCCTAATAGAGTCTACCTCCGGTGCTCATTTTTCCGGCTGGCGTCCTTCTACGACGTCGTCTTCTTCTTCTTCCTCTTTGTTATCTCCACCTGGTGACTCTCTCATTGGCCCGACGCAGCCCTTTGTAATCGGGGTCTCTGGAGGTACGGCATCGGGCAAGACCACAGTGTGTGAGATGATCATTCAACAACTGCAAGATCATAGAGTTGTGCTCGTCTGTCAGGATTCATTCTACCGTGGCTTAACAGATGATGAATCTAAGCACGTCAATGAATATAATTTTGATCATCCTGACGCATTTGATACTGAGCAACTTGTAGAGTGCATCAGCAAGCTCAAAGCTGGACACTCTGTTCAGGTTCCAATATACGATTTTAAAAAGCATCAGCGGTGTTCTGACAAATCTAGACAGGTCAATGCATCTGACGTTATCATTTTGGAGGGAATATTGGTTTTTCATGAACAACGTGTCCGCGACATGATGAATATGAAAATATTTGTTGATACAGATGCTGATGTAAGGCTTGCGCGTAGATTAAAACGTGATATCGTTCAGAGGGGTAGAGATGTACAGTCGGTTCTGGAACAGTATTCAAAATTTGTTAAGCCTGCCTTTGATGATTTCATTCTTCCGTCCAAAAAATATGCCGATATCATAATACCTCGTGGGAAAGAGAATCAGGTAGCAATTGATTTGATCGTTCAACATATCCGCACAAAGCTTGGGCAACACAACCTCTGCAAGATATATCCGAATTTGAATGTTATCCACTCTACGTACCAGATTCGAGGCATGCACACTCTAATTCGTGACAGGGATATATCAAAGCACGATTTTGTTTTTTATTCAGATCGGCTTATTCGTTTGGTAGTGGAACACGGTCTTGGCCATTTGCCATTTACAGAAAAGCAAGTTATCACACCTACAGGATCAATTTACACCGGAGTTGATTTTTGTAAGAAATTGTGCGGCGTATCAGTTATTCGAAGTGGCGAAAGCATGGAGAATGCATTGCGCGCTTGTTGTAAAGGAATTAAAATAGGAAAAATTCTCATCCACCGTGAAGGAGGAACCGAGACCCAGCTTATTTATGAGAAGCTTCCCAAAGATATTTCAGAGAGACATGTTCTCCTTTTGGATCCTATACTCGGTACAGGTAACTCTGCCAGCCAAGCCATTGAGCTTCTCATACGGAATGGAGTTCCAGAGTCCCGGATAATATTCCTTAACCTCATCTCTGCTCCAGAGGGAATACATCGCGTATGTAAGCGTTTTCCATACCTGAAAGTTGTCACGTCGGAGATTGAAGTTAGACTAAATGAAGACTTCCGCGTTATACCAGGGCTGGGAGAATTTGGTGACCGCTATTTCGGTACGGACGAATCTTGA 1398 0.4313 MDVLIESTSGAHFSGWRPSTTSSSSSSSLLSPPGDSLIGPTQPFVIGVSGGTASGKTTVCEMIIQQLQDHRVVLVCQDSFYRGLTDDESKHVNEYNFDHPDAFDTEQLVECISKLKAGHSVQVPIYDFKKHQRCSDKSRQVNASDVIILEGILVFHEQRVRDMMNMKIFVDTDADVRLARRLKRDIVQRGRDVQSVLEQYSKFVKPAFDDFILPSKKYADIIIPRGKENQVAIDLIVQHIRTKLGQHNLCKIYPNLNVIHSTYQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSIYTGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHREGGTETQLIYEKLPKDISERHVLLLDPILGTGNSASQAIELLIRNGVPESRIIFLNLISAPEGIHRVCKRFPYLKVVTSEIEVRLNEDFRVIPGLGEFGDRYFGTDES 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0614 465 FunFam Uridine kinase 40 246 - -
Dere03g0614 465 Gene3D - 40 246 IPR027417 -
Dere03g0614 465 FunFam Uridine kinase 247 462 - -
Dere03g0614 465 CDD PRTases_typeI 320 435 IPR000836 -
Dere03g0614 465 PRINTS Uridine kinase signature 175 185 - -
Dere03g0614 465 PRINTS Uridine kinase signature 43 60 - -
Dere03g0614 465 PRINTS Uridine kinase signature 73 84 - -
Dere03g0614 465 PRINTS Uridine kinase signature 118 133 - -
Dere03g0614 465 PRINTS Uridine kinase signature 211 224 - -
Dere03g0614 465 PRINTS Uridine kinase signature 189 200 - -
Dere03g0614 465 PANTHER URIDINE KINASE 41 373 - -
Dere03g0614 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 236 IPR027417 -
Dere03g0614 465 CDD UMPK 45 243 IPR000764 -
Dere03g0614 465 Gene3D - 247 462 IPR029057 -
Dere03g0614 465 Pfam Uracil phosphoribosyltransferase 261 462 - -
Dere03g0614 465 MobiDBLite consensus disorder prediction 1 33 - -
Dere03g0614 465 NCBIfam uridine kinase 44 243 IPR000764 -
Dere03g0614 465 SUPERFAMILY PRTase-like 246 463 IPR029057 -
Dere03g0614 465 MobiDBLite consensus disorder prediction 12 33 - -
Dere03g0614 465 Pfam Phosphoribulokinase / Uridine kinase family 45 232 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0614 Dere-ChrDere03 10271917 10278199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0614 1 464 PRT Gene Family AT3G27190 76.250 0.0 745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0614 03 10271917 10278199 Dere03g0614 03 10271917 10278199 ECH