Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0599 ATGGCGGCTCTCCACCATACCCCAACCTCACTCCAATCCAATCCCACTCAACCCTCCCCACGACTCCCCAGAACCCTCCTCTCCCACAAACCCCTTCTCAACCTCTCCTTCTCCGCCTCCTCCTTCCCTTCCTCTCTTCAACTCAAATTCGCCGCCTCCACCGCCTCCACCGGCCGCCGCTCCAATGGCGGCGCTCTCGGCGCTAAGATGGTTTCCAGCGCCGCCGCCAGCTACGCCCTCGCCCTTGCCGACGTCGCCAAGGCCAAAAACACCCTCGATTCCACGACCGCCGATATCGAGAAGATCGAGGAAATCTTCGACGACCCCGGGGTATTCTCTTTTTTCACCAACCCTACTATAGAAACCGAGAAGAAGCGCAAGGTAGTGGAAGAAATCGCGACTTCCTCGAGCCTTCAGCCCCATACCCGCAATTTCCTCAACATTTTGGTGGATGCGAAGAGGATCGATCTGATCAAGGAGATAGCGAAGGAGTATGAGTTTGTGTATAACAACTTGACCGACACAGAGCTTGTGGTTGTGAGCTCGGTGGTGAAATTGGAGTCTCAGCACTTGGCTCAGATAGCAAAGCAAGTGCAGAAGCTGACTGGGGCGAAGAATGTGAGGATCAAGACCGTGATTGATCCGAGTTTGGTGGCTGGATTCACAATCAGGTATGGGAATTCGGGATCTAAGTTGATTGACATGAGTGTGAAGAAGCAACTTGAGGAAATTGCTGCTCAGCTTGATTTGGGTGATATCACGCTCAATGTATGA 774 0.5323 MAALHHTPTSLQSNPTQPSPRLPRTLLSHKPLLNLSFSASSFPSSLQLKFAASTASTGRRSNGGALGAKMVSSAAASYALALADVAKAKNTLDSTTADIEKIEEIFDDPGVFSFFTNPTIETEKKRKVVEEIATSSSLQPHTRNFLNILVDAKRIDLIKEIAKEYEFVYNNLTDTELVVVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDITLNV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0599 257 Coils Coil 85 105 - -
Dere03g0599 257 Hamap ATP synthase subunit delta [atpD]. 70 250 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 207 226 IPR020781 GO:0015986|GO:0016020|GO:0046933
Dere03g0599 257 Pfam ATP synthase delta (OSCP) subunit 75 248 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 PANTHER ATP SYNTHASE DELTA CHAIN 58 249 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 Gene3D - 74 166 IPR026015 -
Dere03g0599 257 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 71 173 IPR026015 -
Dere03g0599 257 MobiDBLite consensus disorder prediction 1 23 - -
Dere03g0599 257 PRINTS ATP synthase delta subunit signature 205 220 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 PRINTS ATP synthase delta subunit signature 74 93 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 PRINTS ATP synthase delta subunit signature 143 154 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 PRINTS ATP synthase delta subunit signature 223 241 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 PRINTS ATP synthase delta subunit signature 154 168 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 NCBIfam ATP synthase F1 subunit delta 75 248 IPR000711 GO:0015986|GO:0046933
Dere03g0599 257 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0599 Dere-ChrDere03 10064839 10065612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0599 1 255 Primary Pumps ATPases AT4G09650 59.375 1.89e-97 283