Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0591 ATGGAATCATCATCATCGTCATCGAAGCCTTTCGCCATTTGTCGTTCATCAATTACGTCACCAATGGAGAACAACCAGCAAGCCCAATCCTCCACATACCCACCTCAGCCCCCTGCTCCTCCTCCTCCTTCATCTTCTTTTCACCATCTGCTTCAACAGCAGCAACAGCAGCTTCAAGTGTTCTGGACATACCAGCGCCAAGAGATCGAGCATGTCAACGATTTCAAGAATCACCACCTCCCTCTCGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCAGCCGAAGCCCCCATTCTGTTCGCCAAGGCCTGCGAGCTCTTTATCCTCGAGCTCACCATTCGGTCCTGGCTCCACGCGGAGGAGAACAAGAGGCGCACTCTCCAGAAGAACGATATCGCCGCCGCCATCACCCGCACTGAAATTTTCGATTTCTTGGTCGATATTGTGCCCAGGGACGAGATCAAGGACAAGGCTTCCCTTGGTGGAATGGTGGGCGGCGTCCCTGACTTCTATCCGACCATTGGCCAAGTTGCCGGCCCTCCCGGTGCCATGATGACTGCCCGGCCGGCAGTGGATCCCACCGGCGTGTACGTGCAACCGCCTTCGCAGGCGTGGCAATGGGTGCGGCAGACGGCGGTGTATGATGGATCCTACGTCAGTGGCGGGAACATCGGACAGGGCAATCTTGATGTTGTTATTGCTTATGTGGGAACTGAGATATTTAGATTTGAGAATATATGCCACGTAATGATGGTTGAAAAGCTCTATGTGACAGGCTTCTGCAATTTCTACCTTTCCGCTATTCTGTGTTTAGAAACTGGGGACAAAGTTTATGCTGCTCCTTGTTATGTTTTAGATGTTTTGATGGTTTCAGTTCTTGGTTACACCTGAAAGGTTATAGCTCGTGTTTTTTCCCTTTTGAGGGCTTAG 948 0.5169 MESSSSSSKPFAICRSSITSPMENNQQAQSSTYPPQPPAPPPPSSSFHHLLQQQQQQLQVFWTYQRQEIEHVNDFKNHHLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTEIFDFLVDIVPRDEIKDKASLGGMVGGVPDFYPTIGQVAGPPGAMMTARPAVDPTGVYVQPPSQAWQWVRQTAVYDGSYVSGGNIGQGNLDVVIAYVGTEIFRFENICHVMMVEKLYVTGFCNFYLSAILCLETGDKVYAAPCYVLDVLMVSVLGYTXKVIARVFSLLRA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0591 315 Gene3D Histone, subunit A 45 157 IPR009072 GO:0046982
Dere03g0591 315 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 38 166 - -
Dere03g0591 315 MobiDBLite consensus disorder prediction 1 32 - -
Dere03g0591 315 MobiDBLite consensus disorder prediction 1 50 - -
Dere03g0591 315 Pfam Core histone H2A/H2B/H3/H4 28 142 IPR007125 GO:0003677
Dere03g0591 315 SUPERFAMILY Histone-fold 39 151 IPR009072 GO:0046982
Dere03g0591 315 FunFam Nuclear transcription factor Y subunit gamma 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0591 Dere-ChrDere03 9954299 9957774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0591 44 225 CCAAT-HAP5 Transcription Factor Family AT3G48590 80.423 7.61e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Dere03g0591 Histone 3.6e-17 CL0012