Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0590 ATGGAATGTAATAAAGATGATGCAATTAGGGCTAAGGAGCTTGCAGAGAAGAAGCTTTTAGAAATGGATGTTGCTGGTGCAAAAAGATTTGCCTTGAAAGCTCAAGACTTGTATCCAGGTCTTGATGGTCTTCCCCAACTAATGGCAACTCTTGAGGTGTATGTCTCTGCTGAGAAAAGAATAGATGGAGAAATTGATTGGTACAAGGTCCTTGGTGTGAATCCCTTGGCCAACGACGAAACAATTCGAAGGCAGTACAGGAGACTGGCTCTTACTCTACACCCTGACAAAAACAAATCAGTTGGTTCTGATGGGGCTTTTAAACTTATCTCTCAGGCATGGAGTTTATTATCTGATAAAGCTAAGAGAGCCTTCTATGACCAAAAGTGCTATTTAAGGGGTTCATATCAAGAAGTGTCAAATGGGAAGCCTTCTGTACCAACAGGTCAGAATGGTTTCTTTAATTTCTTCAATACTGCTAACTGGAAGGATAATGACCATGGAACTGGTGCTCATCCCAATCCCACTCCAACATCTCCGGTGTCATTGAAACAATCATTCTGGACCATATGCTGTTCTTGCAGGACACAGTATGAGTACCCTACAGTATATCTCAATTGCAATCTTATATGCAACTGTTGTCACAAGCCATTTTTGGCCTCAGAGGCACCACACTCACCTAAATACCGCAATGCTTCTCGCACTAAGATGCAGAAAAAGAAATTTAAATCAACCAGAATGGAAGGAAATGGTTCTTTTTCCAGAATGTGTCCAACTTCTTCTATTAACTCATCAGAAAATACATTTGGGTCCAGATCTTTCTCCAGGCCTGGTGGTATTTCCAGTGTCCCTACATCAGCTTTTTTGGCTGCTGAAGCTCCTGGTGTTTTTGGGGCGTCATCTAAGCATTTGAAGAGAGGGCATGAAGATACACCACCTCCTTCCATTAGGGGAGAGGGCCATTGTGGGAAAACTTGTGCTACTGAGACAACTTCTTCTGGTTCAGCTTTTGAATCTACTTGTTTTGGTTCTAATTCAGTCTTGAAAGGAGATAGGCCAAGGAAAAAAAGGAGCATTAATGAACGTGGAGTCAATAGTGATAGAACAGAGGTGGAAACCAAAATGGCATCTCAAACCGAAGGAATAAGGTTGACAGGTGAATATAGATCTCTAAAGGGTAGTATTGAGATAGGAAGGATCAATGCTGCTGGAAACTACAAACGTAATGGTATGAGGGATGTAACCCAGCAGCAATTAAGGATCATATTGATGGAAAGGGCTAGGAATATTATACGGAGTAAGCTTAGTGAAGAGAATTTTCCAACTGTGTCAAGGAATTTAGACAAGTCCAAAAAACCTGATAAGGAAGTCAAAGAGATAGACAATGAAAGGGCTAGAAATAGTGTAGAACATGGTGAGGGAAAGTGTCAAGAATTTTTTGATTATGAGACTATGGCCAAAAAGTCTTCCTCTGATCCTGATATTTCTACTTTGGAGGTGGTTGATTCTTTGTCTATGAGTGTTCCGGACCCAGACTTCCATGATTTTGACAATGACCGAACAGAGAAGTCATTTGGTGAGAACCAGGTATGGGCTGCTTATGATGATGATGATGGCATGCCCCGCTACTATGCCATGATTCATAGTGTGATATCCCTAAAACCTTTCAAAATGAGGATGAGTTGGCTTAACTCTAAAAGCAATGATGAATTGGCCCCAATAAAGTGGGTCAGTTATGGCTTTCCAAAGATTTGTGGGGATTTCCGGATAGGCAAGTACGAGTTTAATGGCTCACTTAATTCCTTCTCGCATAGGATTAAGTGGACAAAAGGTGCTAGAGGTGTTATACACATATACCCTAAGAAAGGGGATGTTTGGGCTCTTTATAGAAACTGGTCCCTTGATTGGAATGAACTCACTCCTGATGAAATTGTACAAAAATATGACGTGGTGGAAGTGCTTGAAAACTACAATGAGGAACAAGGTGTGAGTGTTACTCCACTTGTCAAAGTTTCCGGTTTCAAGACAGTATTTTGTCAGCATGCAGATCCAAGGAAGATCAAGAACATTCCCAGAGAAGAGATGTTTTGTTTCTCACACCAGGTGCCTTCATACTTGCTTACGGGTCAAGAAGGTCATAATGCCCCTCCAGGTTGCTTGGAGCTTGATCCTGCTGCTATACCTTTAGAACTTCTTCAGGTGGTAACAGAGGATCCAAAGCAAGAGACAGGAACAACAGTTGTAAATTCTTCTGAACATAGAGTGGGGAACAGAGAGAATCCAAGGAATGGTGATTTGGTTGAGAGCTGCCAACCAACTAAGGTAGAAGGTTCTATAAAAGACATTCCTAGAAAAGTGGTGGCTGAAACAATGAGACAGAAGGATGATAGGCTGGAGAATTTGATTGTATATACGCGGAAACGTGTAAGGGAAAAGGGAGTGCTTGGTGAAAGGAAAAATGAGGATTTAGATACAAGTTTAGAGATCGATAAAGCAGCTTTTGTTGTTTTTGGTGCATATAAGTTGTGGGGTTGCCCTCCAGACTAA 2547 0.4142 MECNKDDAIRAKELAEKKLLEMDVAGAKRFALKAQDLYPGLDGLPQLMATLEVYVSAEKRIDGEIDWYKVLGVNPLANDETIRRQYRRLALTLHPDKNKSVGSDGAFKLISQAWSLLSDKAKRAFYDQKCYLRGSYQEVSNGKPSVPTGQNGFFNFFNTANWKDNDHGTGAHPNPTPTSPVSLKQSFWTICCSCRTQYEYPTVYLNCNLICNCCHKPFLASEAPHSPKYRNASRTKMQKKKFKSTRMEGNGSFSRMCPTSSINSSENTFGSRSFSRPGGISSVPTSAFLAAEAPGVFGASSKHLKRGHEDTPPPSIRGEGHCGKTCATETTSSGSAFESTCFGSNSVLKGDRPRKKRSINERGVNSDRTEVETKMASQTEGIRLTGEYRSLKGSIEIGRINAAGNYKRNGMRDVTQQQLRIILMERARNIIRSKLSEENFPTVSRNLDKSKKPDKEVKEIDNERARNSVEHGEGKCQEFFDYETMAKKSSSDPDISTLEVVDSLSMSVPDPDFHDFDNDRTEKSFGENQVWAAYDDDDGMPRYYAMIHSVISLKPFKMRMSWLNSKSNDELAPIKWVSYGFPKICGDFRIGKYEFNGSLNSFSHRIKWTKGARGVIHIYPKKGDVWALYRNWSLDWNELTPDEIVQKYDVVEVLENYNEEQGVSVTPLVKVSGFKTVFCQHADPRKIKNIPREEMFCFSHQVPSYLLTGQEGHNAPPGCLELDPAAIPLELLQVVTEDPKQETGTTVVNSSEHRVGNRENPRNGDLVESCQPTKVEGSIKDIPRKVVAETMRQKDDRLENLIVYTRKRVREKGVLGERKNEDLDTSLEIDKAAFVVFGAYKLWGCPPD 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0590 848 MobiDBLite consensus disorder prediction 349 369 - -
Dere03g0590 848 MobiDBLite consensus disorder prediction 247 276 - -
Dere03g0590 848 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Dere03g0590 848 PANTHER BNAC03G44070D PROTEIN 1 728 - -
Dere03g0590 848 MobiDBLite consensus disorder prediction 739 754 - -
Dere03g0590 848 PRINTS DnaJ domain signature 102 122 IPR001623 -
Dere03g0590 848 PRINTS DnaJ domain signature 86 101 IPR001623 -
Dere03g0590 848 PRINTS DnaJ domain signature 68 86 IPR001623 -
Dere03g0590 848 MobiDBLite consensus disorder prediction 739 766 - -
Dere03g0590 848 MobiDBLite consensus disorder prediction 301 377 - -
Dere03g0590 848 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Dere03g0590 848 Pfam Domain of unknown function (DUF3444) 504 711 IPR024593 -
Dere03g0590 848 Gene3D DnaJ domain 64 171 IPR036869 -
Dere03g0590 848 SUPERFAMILY Chaperone J-domain 64 156 IPR036869 -
Dere03g0590 848 MobiDBLite consensus disorder prediction 325 346 - -
Dere03g0590 848 SMART dnaj_3 65 122 IPR001623 -
Dere03g0590 848 MobiDBLite consensus disorder prediction 229 276 - -
Dere03g0590 848 Pfam DnaJ domain 66 127 IPR001623 -
Dere03g0590 848 CDD DnaJ 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0590 Dere-ChrDere03 9949859 9952590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0590 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.739 4.15e-28 115