Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0566 ATGGAGAGTGTGAAGCAGAAATGCAAGAGAGTATGGGGAAGATGCAAGCGATGCAACGAAGGTAGCAGCAGGCGCAGAAGCTACAACATACTGTCGAAGGTTCGAGAATCATTGGAAAAGACTAATAAGAAGAAGCATAAGCGGGAAGTGGTGGCTCCCGAGGGATGCCTGTGGGTGTATGTGGGACCAGAGAGGGAGAGATTCGTGTTGAAGATAGAGCTAGCTAATCATCCAATGTTCAAGATGCTTCTGGACGATGCAGAGAGTGAGTATGGGTTCAGAAACGATGGCCCCATATGGCTTCCTTGCGATGTGAATCTGTTCTGCGAGGCGGTGACGGAGATGGAGATAGAGATGGAGGAAGATAGGATGAGTTCTGCTTCTTCTTCATGGGGTTGCACCTTTCATCCTAAGAGTTATCCCAACTCAGTCATGCACAGTCCTCTTTCCTATGATCTTTCTATCCATAGTTATGCTGCAGATTACGAGCTTTTGAGTCCCTGTAGATTGTATGTTTAA 519 0.4682 MESVKQKCKRVWGRCKRCNEGSSRRRSYNILSKVRESLEKTNKKKHKREVVAPEGCLWVYVGPERERFVLKIELANHPMFKMLLDDAESEYGFRNDGPIWLPCDVNLFCEAVTEMEIEMEEDRMSSASSSWGCTFHPKSYPNSVMHSPLSYDLSIHSYAADYELLSPCRLYV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0566 172 Pfam Auxin responsive protein 32 112 IPR003676 GO:0009733
Dere03g0566 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0566 Dere-ChrDere03 9637576 9638094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0566 33 113 Calmodulin-binding Proteins AT4G34750 39.080 5.72e-15 66.6