Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0544 ATGGCTCTGTCCGACGAGTCTCGTCACTCTCTCGTCCCTGGATTTTTGTACTCATCACCATCGTCATCGAAGGGACTCTTCCATCTGGACACGTTGATGAAGAAGAATCAAGGGTTGCCACCAACGACGTCGTCCGTTGTGTCAAATTCATCGTTGCCATCGCTATCGGCAGGAAAGAGTTTTATGATACCGGCGCCGAGCGAGAAGATCGAGATGTTTTCTCCGGCTTTCTTCGCCACATGTGCACTCGGAGGGATGTTATGCACTGGCCCAACCCATATGGCCGTCACTCCTCTCGATGTCGTCAAGTGCAACATGCAGATTGACCGAGCGAAGTATAAGAGCACCACATCAGGATTTGGTATTATACTGAAAGAGCAGGGTGTTAAAGGTCTTTTTAGGGGCTGGGCGCCAACTTTGCTGGGTTACAGTGCTCAGGGAGCTTGCAAGTATGGATTTTATGAGTTCTTCAAGAAGTATTACTCAGATATTGCTGGCCCTGAGTATGCAGCCAAGTACAAAACTTTGATATATCTTGCTGGTTCAGCTTCAGCAGAGGCGATTGCTGTTGTTGGCCTTTGCCCAATGGAGGCAGTCAAAGTTCGCGTACAAACTCAGCCTGGCTTTGCTCGAGGCTTAGCAGATGGTCTCCCCAAGATTGTTAAGGCTGAGGGTGCTCTTGGGTTGTACAAAGGAATTGTACCTCTATGGGGGCGTCAGATTCCATATACGATGATGAAATTTGCTTCTTTTGAGACCATTGTGGAGATGATGTACAAATACGCCATCCCCACCCCTAAAGAGCAGTGCAGCACGCCTCTGCAGCTTGGAGTAAGTTATGCAGGAGGATATGTGGCTGGCATATTCTGTGCCCTTGTGTCACACCCTGCTGACAACCTCGTCTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGATGCTGTGAAGAATCTGGGGTTATGGGGTCTCTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGGACGCTAACTGGAGCACAGTGGGGAATCTATGATTCTTTCAAAGTGTTCGTAGGACTCCCTACTACTGGTGGAGTCGCTCCCAATCCCGCTACCACAGTAGCTGCTACTGCATGA 1125 0.4924 MALSDESRHSLVPGFLYSSPSSSKGLFHLDTLMKKNQGLPPTTSSVVSNSSLPSLSAGKSFMIPAPSEKIEMFSPAFFATCALGGMLCTGPTHMAVTPLDVVKCNMQIDRAKYKSTTSGFGIILKEQGVKGLFRGWAPTLLGYSAQGACKYGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEAIAVVGLCPMEAVKVRVQTQPGFARGLADGLPKIVKAEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMMYKYAIPTPKEQCSTPLQLGVSYAGGYVAGIFCALVSHPADNLVSFLNNAKGATVGDAVKNLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDSFKVFVGLPTTGGVAPNPATTVAATA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0544 374 Gene3D Mitochondrial carrier domain 37 168 IPR023395 -
Dere03g0544 374 Gene3D Mitochondrial carrier domain 169 355 IPR023395 -
Dere03g0544 374 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 60 364 IPR044677 GO:0005315|GO:1990547
Dere03g0544 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 274 353 IPR018108 -
Dere03g0544 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 173 257 IPR018108 -
Dere03g0544 374 Pfam Mitochondrial carrier protein 177 261 IPR018108 -
Dere03g0544 374 Pfam Mitochondrial carrier protein 78 162 IPR018108 -
Dere03g0544 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 76 160 IPR018108 -
Dere03g0544 374 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
Dere03g0544 374 FunFam Phosphate carrier protein, mitochondrial 76 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0544 Dere-ChrDere03 9411301 9414632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0544 5 373 Chloroplast and Mitochondria Gene Families AT5G14040 72.654 0.0 533