Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere03g0533 | ATGCAAATTGAAAACCTCGAAGATTCGCCGATGTTCAGACAGCAGATCCAAACCTTGGAAGAAAACGCGGACTTATTAAGAGCCAGATGCTGGAAGTTCTACAAAGGATGTCGAAAGTACACGGAAGGGCTTGAAGAGGAATATGAAGGGGACATCGCATTTGCAAATGCACTTGAAACTTTTGGAGGAGGGCCTAGTGATCCTCTTTTTGATGTTTTGGGAGGATCTGTTATGACCAAATTGACTATTGCTTTGAGAGAAATCGGTACATATAAGGAACTTCTTCGGTCGCAGGTGGAGCACATGCTGAATGACCGATTACTACACTTTCTCAATGTTGACATCCATGATGCCAAGGAAGCTCGAAAGCGTTTTGACAAAGCCTCCCTTCAATATGACCAGGCACGTGAAAAGTTTTTGTCATTGAGGAAGAGCACTAAGCTTGATACTATCGCTGTCGTAGAAGAGGAATTGCACAATGCAAGAGATGCATTTGAGGAAGCCCGTTTCAACCTGGTCAGTGCTCTCAACCATGTTGAGGCCAAGAAGAGATTTGAGTTTTTGGAGGCTGTCCCAGGAATTATGGATGCTCATCTTCGATACTTTCAACAGGGTTATCAACTATTCCAGCAGATGGAACCTTTCATTAGCGAGGTTTTGACTATTGCGCAACAGTCAAGAGAAAATTACAATACGGAGCAGATTTCTCTTCTTGAAAGAATCCAAGAGTATAAAAGACAAATTCACCAAGATAGTAAGCTGACCTTGAATGGCACATATAGCTCTCCTAATAGAGACATGCAGCCTTTTTCTAGGATACCAAATGAAGTTGCCGATGCAGTAATGGAATCAGCTGCAAATGGAAAGGTTCAAATTCTTCGACAAGGATATCTTTCAAAGCGATCTTCCAATCTGAGAGGAGCATGGAAGAGAAGGTATTTTGTTCTCGACAGTCGAGGAATGTTATACTACCATCGCAAACCAGGGAACTGGATGCAAATGCACGGTGGCAGTCAACCATCTGCACTAAGGAATAGTGGCACTGAAAGTGGTTCCGGGCTTTTGAGCCGTCTTGCTCATCACCATGGAGGTGTCAATGATGAAAAATCTGCAGCACGTCGTGCAGTGAACTTGCTTACGTCAACAATCAAGATTGATGCTGAGCAATCGGATTTAAGATTTTGCTTCAGGATTATTTCACCATCAAAGAACTGCACATTGCAGGCAGAAAATGCGCTGGACCAGATGGATTGGGTTGAAAAGATAACTGGAGTTATTGCCTCCTTGTTGAGTGCCCAGACATTAGAAATGCCTCCCTCAGCTGACTCAGAAAGCAGTGACTCTAACTCCGCCAGCAAGGCCAATATGTTGGAAAATCCGCCAGGTGATGATCAGATTGTAAAAGGTGAAAAGCCAATTGAAGTTCTTAGAAGGGTTAGTGGGAATGACAAATGTGCTGATTGTGGTAAACCCGATCCGGACTGGGCATCCTTAAACCTCGGCATTCTTATATGCATTGAATGTTCTGGTGTTCATCGTAATCTTGGTGTGCATATATCTAAAGTAAGGTCACTGACACTTGATGTGAAAGTCTGGGACTCCTCTGTTTTGGGCATGTTTCAGTCGCTGGGTAATCTCTTTGCAAACTCAGTTTGGGAAGAGCTGTTGCATTCACCAAATAATGCGCAAACAGATGACATGCCAGTTTGTTCATTTAAGGTCAAAAATAAGTTGTTTCATGCAAAGAAACCAGAACATGATGATCCTATTTCGTTGAAGGAGAGATTCATTCACACGAAGTATTTGGAGAAAGTCTTTGTTAACCGGAAGAAGAAAACAGATCGTGTCCATTCACTGCCACACCAGTTGTGGGAAAGCATCTGTGCGAACGACAAAAGAGCAGTGTACCGGCATATTGTCAAGTCAGATGTGGATCTCAATGCTATCAGTGAGCGAGCATCATATGGTGATTCTGACGTGCCTTCTTCAAGTAATATGGACTCATTATCAAAGAAAGAAAACCAACCGGTAGAGTTGCATCAGAAAAAAGGAGAAAATCAGCCGATAGACGATAGACAAGATAGTTCTAGTTCTAGTGTGCTTCACCAGGCATGCCTAACTGCCGATTTAAGCATGATAGAGCTTCTTCTACAGTATGGTGCAGATATAAATGCTCCAGATTCAAAAGGTCAGACACCATTGCATTACTGTATAATCAATGGCAAGAGCCCAGCTGCAAAATTGCTTCTTATGAGAGGGGCCAATGCACATGCTGTAGATAAAGAAGGCAATACTGCTGTCGAGATTGCGTCAAGATCAGATTCTATTGGCAGTGATGTTTTCTCTCTTTTAACAAGCAGATAA | 2364 | 0.4272 | MQIENLEDSPMFRQQIQTLEENADLLRARCWKFYKGCRKYTEGLEEEYEGDIAFANALETFGGGPSDPLFDVLGGSVMTKLTIALREIGTYKELLRSQVEHMLNDRLLHFLNVDIHDAKEARKRFDKASLQYDQAREKFLSLRKSTKLDTIAVVEEELHNARDAFEEARFNLVSALNHVEAKKRFEFLEAVPGIMDAHLRYFQQGYQLFQQMEPFISEVLTIAQQSRENYNTEQISLLERIQEYKRQIHQDSKLTLNGTYSSPNRDMQPFSRIPNEVADAVMESAANGKVQILRQGYLSKRSSNLRGAWKRRYFVLDSRGMLYYHRKPGNWMQMHGGSQPSALRNSGTESGSGLLSRLAHHHGGVNDEKSAARRAVNLLTSTIKIDAEQSDLRFCFRIISPSKNCTLQAENALDQMDWVEKITGVIASLLSAQTLEMPPSADSESSDSNSASKANMLENPPGDDQIVKGEKPIEVLRRVSGNDKCADCGKPDPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDSSVLGMFQSLGNLFANSVWEELLHSPNNAQTDDMPVCSFKVKNKLFHAKKPEHDDPISLKERFIHTKYLEKVFVNRKKKTDRVHSLPHQLWESICANDKRAVYRHIVKSDVDLNAISERASYGDSDVPSSSNMDSLSKKENQPVELHQKKGENQPIDDRQDSSSSSVLHQACLTADLSMIELLLQYGADINAPDSKGQTPLHYCIINGKSPAAKLLLMRGANAHAVDKEGNTAVEIASRSDSIGSDVFSLLTSR | 787 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere03g0533 | 787 | ProSiteProfiles | PH domain profile. | 291 | 427 | IPR001849 | - | |
Dere03g0533 | 787 | Pfam | Putative GTPase activating protein for Arf | 472 | 609 | IPR001164 | GO:0005096 | |
Dere03g0533 | 787 | SUPERFAMILY | Ankyrin repeat | 691 | 776 | IPR036770 | - | |
Dere03g0533 | 787 | MobiDBLite | consensus disorder prediction | 654 | 696 | - | - | |
Dere03g0533 | 787 | Pfam | Ankyrin repeats (many copies) | 699 | 750 | IPR002110 | GO:0005515 | |
Dere03g0533 | 787 | ProSiteProfiles | BAR domain profile. | 1 | 225 | IPR004148 | GO:0005515|GO:0005737 | |
Dere03g0533 | 787 | SUPERFAMILY | PH domain-like | 292 | 448 | - | - | |
Dere03g0533 | 787 | SMART | 5bar | 5 | 218 | IPR004148 | GO:0005515|GO:0005737 | |
Dere03g0533 | 787 | SUPERFAMILY | BAR/IMD domain-like | 4 | 314 | IPR027267 | - | |
Dere03g0533 | 787 | CDD | BAR_SFC_plant | 15 | 215 | IPR035670 | - | |
Dere03g0533 | 787 | ProSiteProfiles | Ankyrin repeat profile. | 696 | 728 | IPR002110 | GO:0005515 | |
Dere03g0533 | 787 | SMART | arf_gap_3 | 470 | 614 | IPR001164 | GO:0005096 | |
Dere03g0533 | 787 | Coils | Coil | 151 | 171 | - | - | |
Dere03g0533 | 787 | MobiDBLite | consensus disorder prediction | 436 | 469 | - | - | |
Dere03g0533 | 787 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 470 | 614 | IPR001164 | GO:0005096 | |
Dere03g0533 | 787 | CDD | ArfGap | 473 | 601 | - | - | |
Dere03g0533 | 787 | MobiDBLite | consensus disorder prediction | 336 | 356 | - | - | |
Dere03g0533 | 787 | MobiDBLite | consensus disorder prediction | 656 | 672 | - | - | |
Dere03g0533 | 787 | ProSiteProfiles | Ankyrin repeat region circular profile. | 696 | 727 | - | - | |
Dere03g0533 | 787 | PANTHER | CENTAURIN/ARF | 4 | 785 | IPR045258 | GO:0005096 | |
Dere03g0533 | 787 | SMART | PH_update | 292 | 429 | IPR001849 | - | |
Dere03g0533 | 787 | MobiDBLite | consensus disorder prediction | 336 | 353 | - | - | |
Dere03g0533 | 787 | Gene3D | - | 284 | 441 | IPR011993 | - | |
Dere03g0533 | 787 | Gene3D | Arf GTPase activating protein | 456 | 616 | IPR038508 | - | |
Dere03g0533 | 787 | PRINTS | HIV Rev interacting protein signature | 524 | 545 | IPR001164 | GO:0005096 | |
Dere03g0533 | 787 | PRINTS | HIV Rev interacting protein signature | 501 | 518 | IPR001164 | GO:0005096 | |
Dere03g0533 | 787 | PRINTS | HIV Rev interacting protein signature | 482 | 501 | IPR001164 | GO:0005096 | |
Dere03g0533 | 787 | Pfam | PH domain | 293 | 426 | IPR001849 | - | |
Dere03g0533 | 787 | ProSiteProfiles | Ankyrin repeat profile. | 729 | 761 | IPR002110 | GO:0005515 | |
Dere03g0533 | 787 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 471 | 609 | IPR037278 | - | |
Dere03g0533 | 787 | CDD | PH_ACAP | 294 | 431 | - | - | |
Dere03g0533 | 787 | Coils | Coil | 227 | 247 | - | - | |
Dere03g0533 | 787 | Gene3D | Arfaptin homology (AH) domain/BAR domain | 3 | 250 | IPR027267 | - | |
Dere03g0533 | 787 | ProSiteProfiles | Ankyrin repeat region circular profile. | 729 | 761 | - | - | |
Dere03g0533 | 787 | Pfam | BAR domain of APPL family | 4 | 233 | IPR004148 | GO:0005515|GO:0005737 | |
Dere03g0533 | 787 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD1 | 453 | 615 | - | - | |
Dere03g0533 | 787 | Gene3D | - | 666 | 777 | IPR036770 | - | |
Dere03g0533 | 787 | Coils | Coil | 118 | 138 | - | - | |
Dere03g0533 | 787 | MobiDBLite | consensus disorder prediction | 673 | 690 | - | - | |
Dere03g0533 | 787 | SMART | ANK_2a | 696 | 725 | IPR002110 | GO:0005515 | |
Dere03g0533 | 787 | SMART | ANK_2a | 729 | 758 | IPR002110 | GO:0005515 | |
Dere03g0533 | 787 | MobiDBLite | consensus disorder prediction | 436 | 456 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere03g0533 | Dere-ChrDere03 | 9273693 | 9284597 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere03g0533 | 469 | 607 | C2H2 Transcription Factor Family | AT4G21160 | 40.000 | 8.98e-21 | 92.8 |