Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0530 ATGGCCCCAGAATCAGAGGAAACATGCGAAAATGCTAATACTCCACCAAAAGGAACAGAGGTTGACTTCAACAGTGAAAGAACCAAAAGCACAAGACGCCCTCGATGGAGCAGACAGGAAACATTGGTTCTCATAGAGGCCAAGAAAGTGGTCGAGAATGGAAGAACAGGGATTGGCCGATACACATCACCAGCCCCTGGTTCTGTTTTGTCTGAACCAAAATGGGATTTGGTCTCATCGCTGTGTAAGAATCAGGGGGTGAACAGAGAAGCTGTTCAGTGTCGAAAAAGATGGAGCAATCTTCTCAGCGATTTCAAGAAGATTAGGACATGTGAATCCAATATGAAGGAAGGGGATAACTCGTTCTGGGTGATGAGAAAAGAAGAAAGGAAAGAGAAGAAGTTGCCAGGTTTCTTTGACGAGGAGTTGTACAATGTATTAAATGGAGGGGTATGTAAAAGTGCAACATTTCCATTGACGACTTCCATTGATATGAGATCAAGAGCAGAGAAAGCCAGGGAGGATGAAGAAGATGAGGAGGAGGAGGAAGCTGAGGCTGGTGAGGCAACTGTTGACAGTGGGAGCAGGGATTGGAGCACAGGGGAGGAAATGAGTGAGGAGAACATAACTAGAAAGAGAATCACTATTCCGTTGAATGTTTCAGGTGCTAGGGAAACAATCACAAAAGCGAACGTCAAAAAGATGCCCAAACATCCCCAGCCTTCTTCAGGTTCAAGCTTCAGAAGGGAGGCTGTGTCTCAAGGGGCATTCAAGAGAAGGCGATTGTCACTAGACAACTTCAAGGACACAGCACATTTCAACAATCAATTTGTGAAAGTACTGGACAGGAATAAAGACATACTGAAATCTCATCATGGAGCTCACAACATAAATTCCCAACTGGCAAGGGAACAGCAGAAGGAGCAACCAGACAGCCTAGTTGTTGCCCTAGGCAAGCTCGCAGATGCCCTGACAAAAATTGCCAACAAGCTATGA 996 0.4538 MAPESEETCENANTPPKGTEVDFNSERTKSTRRPRWSRQETLVLIEAKKVVENGRTGIGRYTSPAPGSVLSEPKWDLVSSLCKNQGVNREAVQCRKRWSNLLSDFKKIRTCESNMKEGDNSFWVMRKEERKEKKLPGFFDEELYNVLNGGVCKSATFPLTTSIDMRSRAEKAREDEEDEEEEEAEAGEATVDSGSRDWSTGEEMSEENITRKRITIPLNVSGARETITKANVKKMPKHPQPSSGSSFRREAVSQGAFKRRRLSLDNFKDTAHFNNQFVKVLDRNKDILKSHHGAHNINSQLAREQQKEQPDSLVVALGKLADALTKIANKL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0530 331 MobiDBLite consensus disorder prediction 174 188 - -
Dere03g0530 331 Gene3D - 36 107 - -
Dere03g0530 331 MobiDBLite consensus disorder prediction 232 252 - -
Dere03g0530 331 Coils Coil 162 189 - -
Dere03g0530 331 SUPERFAMILY Homeodomain-like 32 108 IPR009057 -
Dere03g0530 331 MobiDBLite consensus disorder prediction 22 36 - -
Dere03g0530 331 MobiDBLite consensus disorder prediction 7 21 - -
Dere03g0530 331 MobiDBLite consensus disorder prediction 1 36 - -
Dere03g0530 331 ProSiteProfiles Myb-like domain profile. 28 102 IPR001005 -
Dere03g0530 331 SMART sant 32 104 IPR001005 -
Dere03g0530 331 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 10 331 - -
Dere03g0530 331 MobiDBLite consensus disorder prediction 166 216 - -
Dere03g0530 331 Pfam Myb/SANT-like DNA-binding domain 33 117 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0530 Dere-ChrDere03 9253386 9254558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0530 35 116 Trihelix Transcription Factor Family AT1G33240 34.940 7.49e-06 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0530 03 9253386 9254558 Dere03g0530 03 9253386 9254558 ECH