Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0522 ATGGATCCCGACACATTCACTACCAGCATCTTCAAGTGGGACCCACGCACCATCCTCTCAACTTCCACGCTTAACCGCCCGCCGATTCTCGAGTACGCGATGGCTCCACCGGCGCCGCCTGCGGCCGCCGTGGTGAGGGGGCCGAGGGAGCTGGGAGGGCTGGACGAGTTGTTTCAAGCTTACGGTATTCGGTACTACACTGCTGCTAAGATAGCAGAGCTTGGGTTCACGGTGAGTACTCTTGTCAACATGAAGGACGAAGAGCTTGACGAGATGATGAACAGCCTCTCTCAGATTTTTCGTTGGGATCTCCTCGTCGGGGAACGATACGGTATCAAAGCTGCCGTGAGAGCCGAACGGCGACGTATCGACGACGAGGACTTGCGGCGTCGCAACTTTCTCTCGGCGGACACCACCACCACCAACGCACTTGATGCTCTCTCCCAAGAAGGGTTGTCGGAGGAACCAGTGGTGCAACAAGAGAAAGAGGCGGGAGGGAGTACGTGGGAGGTGGTTGCAGCGACCGAGAGGAGGAAGCAGCAGCAGCAGCAACAGAGGAGGAGACGGAGGACGAGGATGAAGATAAACCAGCATCAGCACCATGACGACGAGAATGAGGATCCAGAAGAGGAGGCGGAAGCAGAAGATATCAACGAAGATGGAATCAACAACAATGGGGGATGTGAGAGACAGAGAGAGCACCCATTCATCGTGACAGAGCCTGGGGAAGTAGCACGTGGCAAGAAGAACGGCCTCGATTATCTCTTCCATCTCTACGAGCAATGCCGCGAGTTCTTGATCCAGGTCCAGAACATCGCCAAGGAACGCGGCGAGAAATGCCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCGAAGAAGGCAGGAGCGAGCTACATAAACAAGCCAAAGATGCGACACTACGTGCACTGCTATGCGTTGCACTGTCTGGACGAGGATGTGTCGAATGAGCTGAGGATGGGCTTTAAAGAGAGAGGGGAGAACGTAGGCGCGTGGAGGCAAGCGTGTTATAAGCCGCTTGTGGCCATCGCAGCGCGTCAAGGTTGGGACATCGATGCCATATTCAACGCACATCCTCGTCTTTCCATTTGGTATGTCCCCACCAAGCTCCGTCAACTTTGTCACGCCGAGAGGAACAGCTCCGCCGCCGCCGCCGCCGCAGCTGGAGCTGGAGCTTCCAGTTCTGTCTCTGTTGGGAGTGCTCACCTCCCTTTCTAA 1239 0.5601 MDPDTFTTSIFKWDPRTILSTSTLNRPPILEYAMAPPAPPAAAVVRGPRELGGLDELFQAYGIRYYTAAKIAELGFTVSTLVNMKDEELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDEDLRRRNFLSADTTTTNALDALSQEGLSEEPVVQQEKEAGGSTWEVVAATERRKQQQQQQRRRRRTRMKINQHQHHDDENEDPEEEAEAEDINEDGINNNGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDVSNELRMGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSSAAAAAAAGAGASSSVSVGSAHLPF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0522 412 PANTHER PROTEIN LEAFY 1 397 IPR002910 GO:0003677|GO:0006355
Dere03g0522 412 MobiDBLite consensus disorder prediction 147 229 - -
Dere03g0522 412 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 225 389 IPR035209 GO:0003677
Dere03g0522 412 Pfam Floricaula / Leafy protein SAM domain 50 126 IPR035079 -
Dere03g0522 412 Gene3D Protein LEAFY 226 395 IPR038276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0522 Dere-ChrDere03 9082271 9084184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0522 1 408 Orphan Transcription Factor Family AT5G61850 61.449 7.68e-160 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Dere03g0522 C_LFY_FLO 7.9e-108 CL0123