Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0494 ATGTCGAGTTTTCATGTGGGTGGCAAAGTGGTGGATAGAGTTGATTTACTGAGGAAGAGGCAATGGCCATGGCGCTTGGATGTTTGGCCTTTCGTTATTATATATGCTCTGTGGCCAACAACAATTCTTCCTAGCCTCGACTTTGTGGATGCTGCCATTGTATTGGGTGGCCTTGTAGCTCTTCACATTCTGTTCTGGCTGTTCACGGTTTGGTCGGTTGATTTCAAATCTTTTGCCCATTACGGCAAGGTTAAAAATATTCACGATGCAGATGCATGCAAAATAATACCAGCTCAGTTTTCAGGTTCTAAAGAAGTTGTGCCACTTAATTTTCGAAAAACAACTGTAGCTTCTTCATCGTCAGTTGATTCAGAAGAGATTTACTTTGACTTCAGAAAACAACGTTTTGTCTATTCGAAGGAGAATGGGACTTTTTGCAAGCTTTCTTACCCTACAAAGGAAACATTCGGATATTATCTCAAAAGTACTGGTCATGGCTCTGAAGCTAAAGTTCTTTCTGCCACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAACCTACATTTCAGAAGTTGTTGAAAGAGCACTGCATGGAGCCTTTTTTCGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTTACTCTATTTATGCTGTTTATGTTTGAGTCAACAATGGCAAAAAGTAGGTTGAAGACTCTAACTGAGTTGAGACGTGTTAGTGTCGATAGTCAGACTGTAATGGTACATCGCTGTGGCAAGTGGGTAAAACTCTCTGGCACCGAACTTTTGCCTGGGGATGTTGTTTCTATTGGACGCTCTTCTGGTCAGAAAGGAGAAGAGAAGTCTGTACCTGCGGACATGCTTATATTGGCTGGAAGTGCAATTGTAAATGAAGCGATTCTCACAGGCGAGTCTACTCCTCAGTGGAAGGTTTCAATCATGGGTAAGGGTCTTGAGGAAAAGTTGTCAGCAAGGCGTGATAAAAGCCATGTCTTATTTGGTGGGACTAAAATTTTGCAGCACACACCAGACAAGACTTTTTCTCTGAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCCTAAGAACGGGATTCGAAACAAGTCAAGGAAAGTTGATGCGGACAATCTTATTTTCTACAGAAAGGGTGACTGCCAATAGCTGGGAAAGTGGGCTGTTCATTTTATTCTTGGTTGTGTTTGCTTTGATTGCTGCTGGTTATGTGCTTATGAAGGGGTTAGAAGATCCCACAAGGAGCAAGTATAAACTTATACTAAGCTGTTCACTTATTATCACTTCTGTGATACCTCCTGAATTACCAATGGAGCTATCGATAGCTGTTAATACTTCCCTAATTGCTTTGGCGCGGCGTGGAATTTTTTGCACGGAACCTTTCAGAATTCCATTTGCTGGGAAGGTTGACATATGTTGTTTTGACAAGACTGGAACACTTACTTCTGATGACATGGAGTTTTCTGGAGTTGTTGGGTTGGCAGGGTCTACAGAATTAGAATCTGATTTGAATAGAGTGCCTGCACGTACAGTGGAAATTCTGGCTTCTTGCCATGCATTGGTGTTTGTTGACAATAAGCTGGTTGGCGATCCTCTTGAGAAGGCAGCACTAAAGGGAATAGATTGGAGTTATAAATCAGATGAGAAGGCTGTTCCAAAAAAGGGGAATGGCCATCCTGTTCAAATTGTCCAGCGACACCATTTTGCATCTCATTTGAAGCGAATGGCAGTTGTTGTTCGCATTCAAGAGGAGTTTTTTGCCTTTGTGAAGGGTGCCCCAGAAATTATTCAAGATAGGCTCACTGATATACCACCATCATATGTTGAGACCTACAAAAAATATACACGTCAGGGGTCTCGTGTTCTTGCTCTTGCCTACAAGTCTCTTCCAGACATGACAGTCAGTGAAGCTAGAAACCTCGACAGGGATGTAGTGGAGAGTGGGCTTACTTTTGCAGGTTTTGTGGTATTTAATTGTCCTATTAGATCAGATTCAGCCTCCGTTTTATCTGAATTGAAAGGATCATCACATGATTTGGTGATGATTACTGGTGATCAAGCTCTGACAGCTTGCCATGTTGCTAGTCAAGTTCATATAATATCAAAACCTACATTAATTCTTAGTCCGGCAAGTAATGGTGAGGGGTATAATTGGATGTCCCCTGATGAGTCTGAAATAGTCCCCTACAGTGTCAAAGAAGTCGAATCTTTATCTGAGACTCATGATCTCTGCATTGGAGGTGATTGCATTGAGATGTTGCAACAAACTTCTACTACTCTACTGGTCATTCCGCATGTGAAGGTGTTTGCTAGAGTCGCTCCTGAGCAGAAAGAACTTATCATGACCACTTTCAAAACAGTGGGAAGGATAACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTAAAGCAGGCCCATGTAGGGGTTGCACTGTTGAATGCATTACCTCCAGCACAAAGTGGGAACTCCTCGTCAGACTCATCTAAGGAAGATGGTACGAAGTCTATCAAGTCAAAAAAATCTAAGCCTGCACTTGATGCATCTGGAAAAACTACTGGCTCTAGTGGAGAAGGCACTTCAAAAGCCAAAGGTGCTTCACGTTCTGATTCCATTAGCCACTCATCTAGTAACCGTCATCTGACAGCTGCAGAAATGCAACGACAGAAGCTTAAGAAAATGATGGATGAGATTAATGAGGAAGGAGATGGTCGAACAGCTCCTGTAGTCAAGCTTGGTGATGCCTCGATGGCATCCCCGTTCACTGCAAAGCATGCATCTGTTGCTCCCACTACTGACATAATTCGTCAAGGTCGCAGTACTCTTGTGACTACCCTCCAGATGTTTAAAATTCTTGGCCTCAACTGCCTTGCCACTGCATATGTGTTGAGTGTCATGTATCTGGATGGCGTCAAGCTAGGTGATGTGCAAGCCACAATAAGTGGAGTCTTTACTGCTGCCTTTTTCCTTTTCATCTCACATGCCCGCCCTCTTCCCACCCTTTCTGCTGAACGGCCTCACCCCAATGTCTTTTGTGCCTATGTCCTTCTTTCTCTCTTGGGACAATTTGCAGTTCATCTGTTTTTTCTGATTTCTTCTGTTAAAGAGGCTGAGAAATACATGCCTGAGGAATGCATCGAAGTAGACTCTGATTTTCATCCCAACCTGGTTAATACTGTTTCCTACATGGTGAGCATGATGCTTCAGGTGGCCACCTTTGCAGTGAACTATATGGGTCATCCTTTCAACCAGAGCATTTCTGAAAACAAACCGTTCCGGTTTGCCCTTATTGCTGCTGTGGGCTTCTTCACAGTGATCACATCTGATATCTTCAGGGACTTAAATGACTGGTTGAAGTTGGTGCCACTGCCGGTGGGATTAAGGGATAAACTGTTGATTTGGGCTGCTCTTATGTTTCTGGTGTGCTATTCATGGGAGAGACTATTAAGATGGGCTTTCCCTGGTAAAATTCCTGCTTGGAAGAAGCGTCAACGTCTTGCTGCATCTAACTTTGAAAAGAAGAAACAGGTCTAA 3582 0.431 MSSFHVGGKVVDRVDLLRKRQWPWRLDVWPFVIIYALWPTTILPSLDFVDAAIVLGGLVALHILFWLFTVWSVDFKSFAHYGKVKNIHDADACKIIPAQFSGSKEVVPLNFRKTTVASSSSVDSEEIYFDFRKQRFVYSKENGTFCKLSYPTKETFGYYLKSTGHGSEAKVLSATEKWGRNVFDYPQPTFQKLLKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVSVDSQTVMVHRCGKWVKLSGTELLPGDVVSIGRSSGQKGEEKSVPADMLILAGSAIVNEAILTGESTPQWKVSIMGKGLEEKLSARRDKSHVLFGGTKILQHTPDKTFSLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLMKGLEDPTRSKYKLILSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLAGSTELESDLNRVPARTVEILASCHALVFVDNKLVGDPLEKAALKGIDWSYKSDEKAVPKKGNGHPVQIVQRHHFASHLKRMAVVVRIQEEFFAFVKGAPEIIQDRLTDIPPSYVETYKKYTRQGSRVLALAYKSLPDMTVSEARNLDRDVVESGLTFAGFVVFNCPIRSDSASVLSELKGSSHDLVMITGDQALTACHVASQVHIISKPTLILSPASNGEGYNWMSPDESEIVPYSVKEVESLSETHDLCIGGDCIEMLQQTSTTLLVIPHVKVFARVAPEQKELIMTTFKTVGRITLMCGDGTNDVGALKQAHVGVALLNALPPAQSGNSSSDSSKEDGTKSIKSKKSKPALDASGKTTGSSGEGTSKAKGASRSDSISHSSSNRHLTAAEMQRQKLKKMMDEINEEGDGRTAPVVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNVFCAYVLLSLLGQFAVHLFFLISSVKEAEKYMPEECIEVDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENKPFRFALIAAVGFFTVITSDIFRDLNDWLKLVPLPVGLRDKLLIWAALMFLVCYSWERLLRWAFPGKIPAWKKRQRLAASNFEKKKQV 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0494 1193 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
Dere03g0494 1193 Gene3D - 483 668 IPR023299 GO:0000166
Dere03g0494 1193 MobiDBLite consensus disorder prediction 862 898 - -
Dere03g0494 1193 Gene3D - 669 844 IPR023214 -
Dere03g0494 1193 MobiDBLite consensus disorder prediction 833 898 - -
Dere03g0494 1193 NCBIfam P-type ATPase of unknown pump specificity (type V) 45 1150 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Dere03g0494 1193 FunFam Cation-transporting ATPase 226 388 - -
Dere03g0494 1193 MobiDBLite consensus disorder prediction 847 861 - -
Dere03g0494 1193 CDD P-type_ATPase_cation 174 1108 IPR047820 -
Dere03g0494 1193 SUPERFAMILY Calcium ATPase, transmembrane domain M 162 1170 IPR023298 -
Dere03g0494 1193 Coils Coil 897 917 - -
Dere03g0494 1193 Pfam E1-E2 ATPase 254 468 - -
Dere03g0494 1193 FunFam Cation-transporting ATPase 484 668 - -
Dere03g0494 1193 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Dere03g0494 1193 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Dere03g0494 1193 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Dere03g0494 1193 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Dere03g0494 1193 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Dere03g0494 1193 SUPERFAMILY HAD-like 483 836 IPR036412 -
Dere03g0494 1193 FunFam Cation-transporting ATPase 669 844 - -
Dere03g0494 1193 Gene3D - 224 388 - -
Dere03g0494 1193 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Dere03g0494 1193 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Dere03g0494 1193 PANTHER CATION-TRANSPORTING ATPASE-RELATED 12 1169 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Dere03g0494 1193 SFLD p-type atpase 469 956 IPR044492 -
Dere03g0494 1193 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Dere03g0494 1193 SFLD Haloacid Dehalogenase 469 956 - -
Dere03g0494 1193 NCBIfam HAD-IC family P-type ATPase 403 507 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere03g0494 1193 NCBIfam HAD-IC family P-type ATPase 776 828 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0494 1 1193 Primary Pumps ATPases AT5G23630 77.992 0.0 1929