Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0488 ATGCTGTGGGTCCCGACGAACACATTTCCTCGACTCCCTCAGCCACGTCGTTTACTCTTTTTGGATCACCAGTTCCCACCCACTCTGGCTATAAATACATCCGCAGTACCATCCTCTTTACTTCATACTACAACTTTTGAAGGTGGTAGTAATATGGAGAAGGAGAAGGAGAAGGCACGCTTTGGGGTTTTGTTCTTGTTGCTCATTATCCTTGCTTCTGGAGACATGGTGGCGCAGAGCGAGGCCAGACACTGCGAGTCGAAGAGCCATCATTTCAGAGGAATGTGCGTGAGCGACCACAACTGCGCCTCCGCCTGCCACTCCGAAGGCTTCACCGGCGGCAACTGCCGCGGTTTGCGCCGCCGCTGCTTTTGCACTAGATTCTGTTAA 390 0.5256 MLWVPTNTFPRLPQPRRLLFLDHQFPPTLAINTSAVPSSLLHTTTFEGGSNMEKEKEKARFGVLFLLLIILASGDMVAQSEARHCESKSHHFRGMCVSDHNCASACHSEGFTGGNCRGLRRRCFCTRFC 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0488 129 Gene3D - 83 129 IPR036574 -
Dere03g0488 129 SUPERFAMILY Scorpion toxin-like 83 129 IPR036574 -
Dere03g0488 129 PRINTS Purothionin signature 84 99 IPR008176 GO:0006952
Dere03g0488 129 PRINTS Purothionin signature 114 128 IPR008176 GO:0006952
Dere03g0488 129 CDD Knot1 96 126 IPR003614 GO:0006952
Dere03g0488 129 Pfam Gamma-thionin family 83 129 - -
Dere03g0488 129 ProSitePatterns Gamma-thionins family signature. 83 106 IPR008176 GO:0006952
Dere03g0488 129 PANTHER DEFENSIN-LIKE PROTEIN 1 60 126 - -
Dere03g0488 129 SMART gth_4 84 129 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0488 Dere-ChrDere03 8704384 8705004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0488 63 129 Plant Defensins Gene Families AT2G02100 61.194 2.77e-25 89.7