Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0474 ATGCCTCTTTTAAAAAGAAAACCTTTTGCCTTGGCTGAGCCAGCTAAGGATTTGGAGCCGCATGAGCTTGTTTACCAAGTTCGATTTACAAAGGAGATTTTCCGAGACTATCATGATTATTTGAACCATATAAATTTATATCGCCAGAGAATTTGGATGTGTAAAGTCACTGGGAAAACTAGCCTGACTTATGAAGAGGCTATGGTGTCAGAAAAGCGGGCCACAGAAAAAGTTCAACAAATTCCCAAAGAATTAATGGCTCCTGCTTTAAGGATTATTCAGTACAGCCTGCTTCCTTTGAGGGATCTTGCCGACACAATAGCTGAAAAATTGCAGGAGCGGTTATATGTGGGTGCTGAACTACATGGAAAAAAGGATGATGGAGTACATCCGTGCAAAATATTGAAAGTTATGCAGGAAGGAGCTGACAAATTCCGTTATGAGGTAGCTTGGCTTGACAAAAACAAGATTACAATTGAAAAAACAGAAGTCAGTGCTGAAGATTTGCTACAGAAGAAGCCGCCTTTTAGCAGAAATATCTTGAAATCTTTTATCCGGGAATCTACATATCGGAATGCTCCTTGGGTAATACATGATGAACTGGCACGAAATTATGGAATCTCAACTGATATTCCAGAGGAGTTAAGAGGAAGAGCTTTCTTCAAAAATGGGCTTTTGATTTGCAACAAGAAAAGGAAAAATGAGGATATAAATGGAGAAACTGAAAATTGCAAACGGAAGAAGTCAGACCAGGCAAAAACTGAGGGTTCTACTTTAGTGAAAGAGAATGACCAGTGTAAGGAAGAACTTATCAAATATCCAATTGACGATCTATTGGTGAAGCCTAGTCCAAGTGATCCTGTTTTCACTGATCGTCCTTCTCCATCAAGGGACTTCAATGTTCCAATTCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGCTATTGCACTTGTCACCCTACTCTCTAGAAGATTTTGAAAATGCTATCTGCCACAAGGAAAGCAATGTGGTTCTCCTCATGGAATCTCATGCAGCACTCTTACGGGTGCTCATGAAAGACAATGGTGAATACACTTCAGCTGTACAAAAAAGAAAGCGGAAGTTTAAGATTACAATGATTAATTGGCAAGAATATTTATGCGATTTTGTTGAAATGATCAATGTTCCTGCATTACGGCACTATGAAGCTACCATAAAAAGGGGACATTATGGCCTTGTCGATGTCAATGCTAAATTAGAAATCCTACGTGGATTGGTCAATCGAGCCGTTGAAACTTCAATTTTCAGGGAAAAGTTGGATGAGGTTATTGAACAGCGGCAGGCACTTGGTGTTACTAGAAGGGGAGAAGCACTGGAAGATGCTAGGAAAAGAAGAGAAGAAAAGGAGCGCCTGAAAGCTGAGTTTGAAAGCAATGGGAGTATGGATGGGCATGGTCTCCAAAATGTTTCAAGTGTCTCAACAAAAAATAATCACAGTATTCAGAATGGAGACATAGGAAAGAAAAGAAATGGAGAGAAAGAATCATCTAGGCAAAGCGATGCTTTGGGTGGAAGCAATGTGGTTAAGCATTCGGACTGTGCATCAAAAAAGGCACCTAAGAAGCTGAGTTTAGAACTGAAAGAACCAGCAGAAAATGGAAAAGAATCACCCAAAAAGGAATCACAGAAGCAATCAAAGGGCGAGAAGCATTCGAACTGTGCATCAAAAAAGGCACCTAAGAAGCTGAGTTTAGAACTGGAAGAACCAGCAGAAAATGGAAAAGAATCATCCAAAAACGAATCACAGAAGCAATCAAAGGGCGAGAAGGATCCATCAGAGAAGAATAGTATAGAACGGAGGAGAGAATATTTTGAACGGGAGATGGAGAAACGATTTATTCGTACCAGCCCCTTAGGTAAAGACAGGCATTACAACAGGTATTGGTGGTTCCGCCGTGATGGGAGGATATTTGTAGAAAGTTCTGATTTTAAGGAGTGGGGATACTACAGCAGCAAGGAAGAGCTTGATACATTGATGAGTTCACTGAATCGTAAGGGTGAACGGGAAAGAGCATTGCAAAAACAACTGGAAAAATATTATAGTAGAATATGTACGGAACTTCAGAAAAGATCAAAGGATCTGATTCAGAAGATTGCACTGGATGAATCTGTGCTTCGAAGGTCTACCCGTGTTCGAGCCCCACCTAGGGAAAATCCTGCCAATGCTTTCCTCAAATATGTTAACAAGTGGAAGGAAGAGTAG 2265 0.4035 MPLLKRKPFALAEPAKDLEPHELVYQVRFTKEIFRDYHDYLNHINLYRQRIWMCKVTGKTSLTYEEAMVSEKRATEKVQQIPKELMAPALRIIQYSLLPLRDLADTIAEKLQERLYVGAELHGKKDDGVHPCKILKVMQEGADKFRYEVAWLDKNKITIEKTEVSAEDLLQKKPPFSRNILKSFIRESTYRNAPWVIHDELARNYGISTDIPEELRGRAFFKNGLLICNKKRKNEDINGETENCKRKKSDQAKTEGSTLVKENDQCKEELIKYPIDDLLVKPSPSDPVFTDRPSPSRDFNVPIHCVGDLLMVWDFCTSFGRLLHLSPYSLEDFENAICHKESNVVLLMESHAALLRVLMKDNGEYTSAVQKRKRKFKITMINWQEYLCDFVEMINVPALRHYEATIKRGHYGLVDVNAKLEILRGLVNRAVETSIFREKLDEVIEQRQALGVTRRGEALEDARKRREEKERLKAEFESNGSMDGHGLQNVSSVSTKNNHSIQNGDIGKKRNGEKESSRQSDALGGSNVVKHSDCASKKAPKKLSLELKEPAENGKESPKKESQKQSKGEKHSNCASKKAPKKLSLELEEPAENGKESSKNESQKQSKGEKDPSEKNSIERRREYFEREMEKRFIRTSPLGKDRHYNRYWWFRRDGRIFVESSDFKEWGYYSSKEELDTLMSSLNRKGERERALQKQLEKYYSRICTELQKRSKDLIQKIALDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0474 754 ProSiteProfiles WAC domain profile. 22 127 IPR013136 -
Dere03g0474 754 MobiDBLite consensus disorder prediction 454 622 - -
Dere03g0474 754 MobiDBLite consensus disorder prediction 454 478 - -
Dere03g0474 754 Coils Coil 455 479 - -
Dere03g0474 754 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Dere03g0474 754 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 752 - -
Dere03g0474 754 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Dere03g0474 754 MobiDBLite consensus disorder prediction 482 505 - -
Dere03g0474 754 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 634 700 IPR028941 -
Dere03g0474 754 SMART testlast3 303 364 IPR018501 -
Dere03g0474 754 MobiDBLite consensus disorder prediction 534 622 - -
Dere03g0474 754 Pfam DDT domain 304 361 IPR018501 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0474 622 699 Homeobox Transcription Factor Family AT5G44180 40.230 1.02e-06 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Dere03g0474 WAC_Acf1_DNA_bd 9.8e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0474 03 8591536 8596948 Dere03g0474 03 8591536 8596948 ECH