Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0471 ATGGCCGCAAAGATTTGCTATGGCTCTCGACTCTTATCCTGTGAAACTCAGGTGTACCATCATCCACAACGGCATGGTCGACGAATCAGAACTCCAAGAACAACTAGCAAATTGCAGCTTTTATGTCCACTCAAAACTTCTTTCTCTTCTTCTCTCTCTAAAAATGGTTCCTTCTCCAGAACTTTCCGCGCCAACAGATTCAGAGTATTCTGCCAGGTTGCTGGCCTCTACGATCTCGAACACGCCGCCAAAGTTGGCCAGGACCGTCTCTCTAAGGTTCCTGTCTCTAATATAAGGAATTTCTCCATCATTGCTCATATTGACCACGGGAAATCAACCTTAGCTGATAAATTGCTTCAAGTGACTGGTACCGTTCAGCAGCGAGAAATGAAGGATCAGTTTCTCGATAACATGGATTTAGAAAGAGAAAGAGGCATCACAATTAAGCTGCAGGCAGCTCGAATGCGTTATATGTTTGAAGATGAACCATATTGCTTAAATCTGATCGATACTCCAGGGCATGTTGACTTCTCTTATGAGGTTTCGCGATCACTTGCTGCATGTGAAGGTGCTCTTCTTGTAGTAGATGCTTCCCAGGGAGTTGAAGCACAAACATTAGCTAATGTTTATTTGGCCTTGGAGAACGACCTTGAAGTTATCCCTGTTTTGAATAAAATAGATCTCCCAGGTGCTGAACCAGATCGAGTTATTAAGGAGATAGAAGAGGTTGTTGGGTTAGATTGTAGCAATGCAATCCTATGCTCTGCAAAGGAAGGAATAGGTATAACTGATATTCTCAATGCAATTGTTACAAGAATACCATCACCTGCTGATACAGCTGAAAGGCCATTGAGGGCTCTAATTTTTGATAGTTACTATGATCCATATAGGGGTGTCATTGTATATTTTCGAGTTGTAGATGGAACTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGAAAAGGATTATTATGCTGATGAAATAGGAGTTTTGTCTCCCAATCAACTCCAAGTTGAAGAATTGTATGCGGGTGAGGTGGGCTATCTTTCAGCATCCATAAGAACTGTAGCTGATGCCAGGGTGGGTGACACTATTACTCATTATGGGAGACAAGCAGAGAACTCACTCCCAGGATATGAGCAAGCCACTCCGATGGTGTTTTGTGGCTTATTTCCTGTTGATGCTGACCAATTTCCTGAGCTACGTGATGCACTTGAGAAGCTACAGCTCAATGATGCTGCACTGAAGTTTGAACCTGAGACCTCAAGTGCTATGGGATTTGGATTTAGATGTGGGTTTCTTGGACTTCTTCATATGGAAATTGTTCAGGAAAGACTTGAGAGAGAATACAATCTGAGCCTGATAACAACTGCCCCAAGTGTTGTATATAGGGTGAACTGTGTTAATGGTGATACTGTTGAATGCTCAAACCCATCTTTACTCCCTGAACCTGGAAAGCGGAAGTCAATTGAGGAGCCACTTGTTAAGATTGAGATGCTTACACCTAAGGATTACATTGGTCCCCTTATGGAACTGGCACAAGACAGAAGAGGGCAATTTAAAGAAATGAAATTTATCACTGAAAATAGAGCATCAATCACCTATGAATTACCACTAGCTGAGATGGTTGGTGATTTTTTTGACCAGTTAAAGTCAAGAAGTAAGGGTTATGCTAGCATGGAGTATACTTTCATTGGGTACAAAGAAAGTGATTTAATTAGGCTTGACATACAGATAAATGGTGAGCCAGTGGAACCATTGGCCACTATTGTTCACAAAGATAAGGCATATTCAGTAGGAAGGGCTTTGACTCAAAAGTTGAAAGAGCTCATACCACGTCAAATGTTTAAAGTACCTATTCAAGCTTGCATAGGTTCAAAAGTGATTGCTAGTGAAGCTTTATCTGCAATAAGGAAGGATGTATTGGCTAAATGCTACGGTGGAGACATTTCAAGGAAAAAGAAATTACTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAAGCAATAGGTAAAGTTGACGTACCTCAAGAAGCGTTCATGGCGGTTTTGAAACTTGAAAAGGAGTGGCAATCAGTTGCATATAAGATGCTGGATCTCATTTTAATCTCAGCTCATGTAATTCTTTTTGCATCTTCTCAGAAAGAGATTCTTATTAGGAAATGCATAAGATGA 2181 0.4076 MAAKICYGSRLLSCETQVYHHPQRHGRRIRTPRTTSKLQLLCPLKTSFSSSLSKNGSFSRTFRANRFRVFCQVAGLYDLEHAAKVGQDRLSKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVQQREMKDQFLDNMDLERERGITIKLQAARMRYMFEDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEVIPVLNKIDLPGAEPDRVIKEIEEVVGLDCSNAILCSAKEGIGITDILNAIVTRIPSPADTAERPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASEKDYYADEIGVLSPNQLQVEELYAGEVGYLSASIRTVADARVGDTITHYGRQAENSLPGYEQATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRKSIEEPLVKIEMLTPKDYIGPLMELAQDRRGQFKEMKFITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFIGYKESDLIRLDIQINGEPVEPLATIVHKDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEWQSVAYKMLDLILISAHVILFASSQKEILIRKCIR 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0471 726 PANTHER TRANSLATION FACTOR GUF1-RELATED 79 688 IPR006297 GO:0005525
Dere03g0471 726 Gene3D - 95 278 IPR027417 -
Dere03g0471 726 SUPERFAMILY EF-G C-terminal domain-like 492 587 IPR035647 -
Dere03g0471 726 FunFam Translation factor GUF1, mitochondrial 573 647 - -
Dere03g0471 726 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 136 151 IPR031157 -
Dere03g0471 726 SMART EFG_C_a 491 579 IPR000640 -
Dere03g0471 726 Hamap Elongation factor 4 [lepA]. 93 691 IPR006297 GO:0005525
Dere03g0471 726 NCBIfam translation elongation factor 4 97 688 IPR006297 GO:0005525
Dere03g0471 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 302 IPR027417 -
Dere03g0471 726 FunFam Translation factor GUF1, mitochondrial 379 460 - -
Dere03g0471 726 CDD EF4_II 284 369 - -
Dere03g0471 726 FunFam Translation factor GUF1, mitochondrial 461 571 - -
Dere03g0471 726 CDD LepA 99 276 - -
Dere03g0471 726 CDD EF4_III 386 461 - -
Dere03g0471 726 SUPERFAMILY EF-G C-terminal domain-like 385 463 IPR035647 -
Dere03g0471 726 Gene3D Translation factors 279 378 - -
Dere03g0471 726 PRINTS GTP-binding elongation factor signature 219 228 IPR000795 GO:0003924|GO:0005525
Dere03g0471 726 PRINTS GTP-binding elongation factor signature 183 194 IPR000795 GO:0003924|GO:0005525
Dere03g0471 726 PRINTS GTP-binding elongation factor signature 143 151 IPR000795 GO:0003924|GO:0005525
Dere03g0471 726 PRINTS GTP-binding elongation factor signature 100 113 IPR000795 GO:0003924|GO:0005525
Dere03g0471 726 PRINTS GTP-binding elongation factor signature 167 177 IPR000795 GO:0003924|GO:0005525
Dere03g0471 726 CDD lepA_C 494 573 IPR035654 -
Dere03g0471 726 FunFam Elongation factor 4 95 278 - -
Dere03g0471 726 Gene3D - 573 647 IPR038363 -
Dere03g0471 726 Pfam Elongation factor G C-terminus 492 574 IPR000640 -
Dere03g0471 726 Gene3D Elongation Factor G (Translational Gtpase), domain 3 379 460 - -
Dere03g0471 726 Pfam GTP-binding protein LepA C-terminus 581 687 IPR013842 -
Dere03g0471 726 Pfam Elongation factor Tu domain 2 298 368 IPR004161 GO:0005525
Dere03g0471 726 Gene3D - 461 572 - -
Dere03g0471 726 FunFam Translation factor GUF1, mitochondrial 279 378 - -
Dere03g0471 726 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 90 690 IPR027518 -
Dere03g0471 726 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 96 277 IPR000795 GO:0003924|GO:0005525
Dere03g0471 726 SUPERFAMILY Translation proteins 276 381 IPR009000 -
Dere03g0471 726 NCBIfam small GTP-binding protein domain 99 268 IPR005225 GO:0005525
Dere03g0471 726 Pfam Elongation factor Tu GTP binding domain 97 275 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0471 Dere-ChrDere03 8549217 8557935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0471 98 331 Eukaryotic Initiation Factors Gene Family AT3G22980 34.008 1.44e-24 108