Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0464 ATGCATGTGTTGATGATTCATAATACTACGTGGACCAAAGTCCAAAAAGGACACCGCGCCGGATACGGCGTCGTTGAGTCCAAACCCCATCCAACGTTATCACTAGGATCGGGGCCCCTATGTAGCCCCATCATTCAGTTCATTTTGATCTTGACACTCATCATCATGACAGCAATAAAGTTCTTCATTTGCCTCTCTCCTTCCAGTGTTCATGGTGGACTCAAGCGCCCTTGCCTTCAAGCTAGCTTAGATACCAAGGAGCCTAACAACATGCTTGGGCCAAAATTTATTGGGGATACTCTAAAACTAATGACAAGGCTGCTGGTATTCCTCAGTGTCTTGACACTCAGTTCAGCAATCACAGATCCTGATGTCGAAGGTGAAGCTTTATATGAATTTGGGAAGGCTTTCCATGATCCCAACCATCAAATAGCAGATTGGAATAATTTTTTTGTGAGCGCATGCTTTAGTTGGTCCCATGTTACTTGTAGAAATGGACACGTTATAGCCCTGAGCCTGGCTTCAATTGGACTTTCCGGAACACTTTCTCCTTCTGTCACCAGATTGAAATATTTGGTTAGCTTGGAGTTGCAGAAGAACAAACTTTCAGGCACATTACCTGATTTCATTGCTAATTTGACACAGCTACAATATCTAAATCTTGGAGACAATCATTTTTATGGTTCTATACCAGCTAGGTGGGTCCAACTCTCCAGTCTAAAGACACTGATCTTGAGAGGGAACAACTTAACCGGATCCATACCAGATACTCTTGTAACTCTTAGTGGGTTGGCAGAATTGGATCTTTCATCTAGTGGTCTGACTGGAGGCATCCCAACGCAACTCTTTTCAGTTCCAAGCTATAACTTTTCAAATACGCACCTTCATTGTGGATCTCACTTGGAGCAGCCTTGCGTTTCTAATTCTGCTCTTCCAGCTTCAACCAACAAATCAAAACTTGCAGTGTTTGTAAGTTTTGCAAGCTGTGGTGCATTTGCACTTCTTTGTCTTGGGGCTATCTTTGCATATAGATACTATTACATACGCAGACCCAAACATGAAGTCTTTGTTGATGTTTCAGGTGAAGATGAGAGCAAAATTTCCTTGGGACAACTGAGAAGATTTTCTTTGCGAGAGCTCCAACTTGCTACTAAAAATTTCGGTGAAAGTAATGTGATTGGGCAGGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTCTCAGATAACACTAAAGTTGCTATTAAACGTCTGGCTGATTATAATAACCCTGGTGGAGAGGCTGCATTTCAAAGAGAAGTTGAACTTATAAGTGTTGCAGTTCATAGGAATCTCCTACGCTTAATTGGGTTCTGCACAACCTCTACTGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTAAGTGTAGCATATCGGTTAAGAGATCTAAAACCAGATGAGAAAGGCTTGGACTGGCCAACAAGAAAGCGTGTGGCTTTTGGTACAGCCCATGGCTTGGAGTATCTACATGAGCAATGTGTTCCCAAGATTATACACCGTGATTTAAAGGTTGCAAACATCTTATTAGATGAAGACTTTGAAGCTGTTCTTGGAGATTTTGGGCTGGCTAAGCTGGTTGATACAAGATTGACTCATGTTACCACTCAGGTGCGAGGCACAATGGGTCATATTGCCCCAGAATATCTGTCCACAGGAAAATCATCAGAGAAGACCGATGTCTTTGGATATGGCATAACACTTCTTGAAATTGTCACAGGTCAGCGTGCCATAGACTTCTCCCGGCTTGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAGCTACTGAGAGAAAACAGGCTGGAGGACATAGTGGATAGGAATCTGGAGAGTTATGATCCAAAGGAAGTAGAGACAATAGTTCAGGTAGCATTGCTTTGCACGCAAGGGATGCCAGAGGATCGGCCAAGCATGGCAGAAGTAGTGAAGATGCTTCAGGGAGTGGGTTTAGCAGAGAGATGGGCTGAATGGGAGCAACTTGAAGAGATAAGTAATCAGGAGTTTTCACTGCTCTCTCACCAATTTGCTTGGGCTGATGAATCCACTTATGATCAAGAGGCTATACAGCTCTCCAGGGCAAGATAA 2130 0.4296 MHVLMIHNTTWTKVQKGHRAGYGVVESKPHPTLSLGSGPLCSPIIQFILILTLIIMTAIKFFICLSPSSVHGGLKRPCLQASLDTKEPNNMLGPKFIGDTLKLMTRLLVFLSVLTLSSAITDPDVEGEALYEFGKAFHDPNHQIADWNNFFVSACFSWSHVTCRNGHVIALSLASIGLSGTLSPSVTRLKYLVSLELQKNKLSGTLPDFIANLTQLQYLNLGDNHFYGSIPARWVQLSSLKTLILRGNNLTGSIPDTLVTLSGLAELDLSSSGLTGGIPTQLFSVPSYNFSNTHLHCGSHLEQPCVSNSALPASTNKSKLAVFVSFASCGAFALLCLGAIFAYRYYYIRRPKHEVFVDVSGEDESKISLGQLRRFSLRELQLATKNFGESNVIGQGGFGKVYKGVLSDNTKVAIKRLADYNNPGGEAAFQREVELISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKPDEKGLDWPTRKRVAFGTAHGLEYLHEQCVPKIIHRDLKVANILLDEDFEAVLGDFGLAKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEIVTGQRAIDFSRLEEEEDVLLLDHIKKLLRENRLEDIVDRNLESYDPKEVETIVQVALLCTQGMPEDRPSMAEVVKMLQGVGLAERWAEWEQLEEISNQEFSLLSHQFAWADESTYDQEAIQLSRAR 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0464 709 Gene3D Ribonuclease Inhibitor 123 307 IPR032675 -
Dere03g0464 709 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 107 671 - -
Dere03g0464 709 SMART serkin_6 387 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0464 709 FunFam Leucine-rich repeat receptor-like protein kinase 123 280 - -
Dere03g0464 709 Gene3D Phosphorylase Kinase; domain 1 356 463 - -
Dere03g0464 709 Pfam Protein kinase domain 390 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0464 709 FunFam Somatic embryogenesis receptor kinase 1 356 463 - -
Dere03g0464 709 Gene3D Transferase(Phosphotransferase) domain 1 464 680 - -
Dere03g0464 709 SUPERFAMILY L domain-like 127 296 - -
Dere03g0464 709 FunFam Somatic embryogenesis receptor-like kinase 1 464 680 - -
Dere03g0464 709 ProSiteProfiles Protein kinase domain profile. 387 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0464 709 SUPERFAMILY Protein kinase-like (PK-like) 365 660 IPR011009 -
Dere03g0464 709 ProSitePatterns Protein kinases ATP-binding region signature. 393 415 IPR017441 GO:0005524
Dere03g0464 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Dere03g0464 709 Pfam Leucine rich repeat N-terminal domain 125 163 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0464 Dere-ChrDere03 8458267 8463799 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0464 104 709 Receptor kinase-like Gene Family AT5G10290 55.921 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dere03g0464 Pkinase 9.5e-44 CL0016