Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0462 ATGAGATTTTGCTTTATAGTTCCTCATTGCTCTTCGTTGCAAAGAAATGCCATCATTACTGACATACCAGAGGAATTGGGAAATCTGACAGACTTGACCAGGTTGGATTTGGAAAGCAACAGATTAACTGGTGAAATACCATCTTCCCTCAGTAAAGTTAAAGAGCTTCAATTCCTGACTTTAAGTCAAAACAATCTCAGTGGGTCTATTCCTGAATCGCCTCCCAGCCTCCTTAGCTTGATCAATGTGTATGTGACAAATTCTATGATGCAGAGTACAGTTTTTCCATATGGCACTTTTACAGGATATGAGTTGAATTGTGGCTCAAATTATCCTCGCCCATGTGCATCTGATAGCACATATCAAGGTTTACCTCATAAAGAAAGGATTGGCCTTATAGTTGGGATTATTGTAGCATTAGATATTATTCGTTTTCTTGGTGGTCTGCTGTTCTTCTGGTGCAAACGCATATACAAGGGCTACAAGCGTGAAGTTTTTGTAGATGTGGCAGGGGAAGTTGACCAGTGGATAGCATTTGGTCAAAGAAAAGGTTTTGCATGGAGAGAATTACAGATAGCTACGGATGACTTCAATGCGAAAAATTTTCAAGGACAGGGAGGGTTTGGGAAGGTTTATAAAGGTATTCTCCCTGGTAGCACAAAGGTTGCTGTCAAAAGATTGGCCTACAAGAAAGCAAGTGGCTCTGGGACAGCCCGTGGTCTAGAATACCTTCATGAGCATTGCAATCCTAAGATTATCCATCGGGATGCGAGGGCAGCTAATGTATTACTGGATGAAGATTTTGGGGCAATTGTTGGTGACTTTGATTTGGCAAGGCTTGTTGATGTCTTAAGGACTAATGTGACTACTCAAGTTCGTGGGACAGTGGGCGACATAGCTCCTGAATGCTTTGTCAACTGGAAAATCTTCAGAAAGAATTGA 942 0.4151 MRFCFIVPHCSSLQRNAIITDIPEELGNLTDLTRLDLESNRLTGEIPSSLSKVKELQFLTLSQNNLSGSIPESPPSLLSLINVYVTNSMMQSTVFPYGTFTGYELNCGSNYPRPCASDSTYQGLPHKERIGLIVGIIVALDIIRFLGGLLFFWCKRIYKGYKREVFVDVAGEVDQWIAFGQRKGFAWRELQIATDDFNAKNFQGQGGFGKVYKGILPGSTKVAVKRLAYKKASGSGTARGLEYLHEHCNPKIIHRDARAANVLLDEDFGAIVGDFDLARLVDVLRTNVTTQVRGTVGDIAPECFVNWKIFRKN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0462 313 SUPERFAMILY Protein kinase-like (PK-like) 175 307 IPR011009 -
Dere03g0462 313 Gene3D Transferase(Phosphotransferase) domain 1 232 312 - -
Dere03g0462 313 Pfam Leucine rich repeat 13 66 IPR001611 GO:0005515
Dere03g0462 313 Gene3D Ribonuclease Inhibitor 8 123 IPR032675 -
Dere03g0462 313 ProSiteProfiles Protein kinase domain profile. 89 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0462 313 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 236 305 - -
Dere03g0462 313 Gene3D Transferase(Phosphotransferase) domain 1 180 231 - -
Dere03g0462 313 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 11 94 - -
Dere03g0462 313 Pfam Protein kinase domain 237 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0462 313 SUPERFAMILY L domain-like 13 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0462 Dere-ChrDere03 8445356 8449537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0462 12 302 Receptor kinase-like Gene Family AT5G10290 43.014 3.56e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dere03g0462 Pkinase 8.7e-09 CL0016