Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0455 ATGCAGGAGGAGAATAAGAAGATGAAAGTGAAGAAAGGATGGCTTGCTGTTCAGGTTGGTTTGGAGGAAGAAGACGATGGCACAACTCACAAATTTGTCATCCCTATTTCCTATCTCTACCATCCTCTCTTCCGACGCCTTCTCGACAAAGCTTACGACGTCTATGGCTACCACGCCAATGGCCCTCTCAAGCTTCCTTGTTCCGTCGACGACTTCCTCCACCTCCGATGGCGGATCGAGAAAGAGTCCACTCACAGTCACAGTCACCACCACCACCACCATAGCCATCATCACCACCTTCCTCACGCTCTGTATTTTCACTCTTATCTTAAGGTTATGGCAACCGGCGATATTGATCTGCTAAAGAAGGCAAAGAAACTTGAGTCAGAGGAATTAGCTAATGTCAAGTTTACTCCTGCATGTTTTTCTGGTCTTGATAAGCTCCTTAGGGATGCTTATGCTGTACGATGCCCAAAACCTATTGATTATTACAATAGGAAAGATCTGGTTCGCATCTTCAACATGATAGCCAAGGAAATATATGGCAATAGTAATAGCTCCCCGGTTGTGGAAGGATATGGCTCTTTTGTTATGGATATGTTCAGTGATGGAAGTGATCTTGACTTGTCTATAAATTTCAAAAACAATTCAACTGAAGTTCCAAGGCAGAAGAAAATTGAAACCCTTCGAAAGTTTGCTAAAAAGTTATATTCACTTCAAAGAAAAGGAATTGTTGGAGGAGTACAGACTATCATGACTGCCAGGGTGCCACTTCTAAAAGTTACTGATTGTGGTACTGGCATTGAATGCGATTTATCAGTAGATAACAAGGATGGCATTGCAAAATCCCATATTATCTATGCAATTTCTACCATAGATGAAAGATTTCAGAAGTTAAGTATTCTGATGAAGTCTTGGGCAAAAGCACATAACATCAACTGTTCCAAAGACCGGACTCTGAACTCTTTATCTATTGTGTCTTTGGTTGCTTTTCATTTGCAGACTCGCAATCCTCCTATATTACCTCCATTCTCTGCTTTGCTTAAAGAGGGAGCTAATCCAGCAGCTGTGACAAAGGTTGTTAGCAAATATTTTAACTATGGGAAAAAAAACAGAGAGTCATTGGCTGAGCTTTTAATTACTCTTTTGGTCAAGTTGGCATCAGTTGAAAAGCTGTGGCAGGAAGGTCTCTGTGCAAGCTTGTTTGAAGGATCATGGATTTGTAAATCATGGGATTCCCGATCTTACTCATTAAGTGTTGAGGATTTCACAGATATGTCTCAAAATGTTGCACGAGCTGTTGGAACTGAAGAGGTAAAAATGATCTACAGATGCATCCGTGAATCTCTTAAATACTTTTTGGATTTTCTAAATGGCCGGATGCCAGAAACTAAGTTGATTGATCTTCTGTTTGGAAGACATATGGTTTCTACTATAGGAAACCAGGGTGCTGGGCACATAGATGAAAATCAGATGAATGTTAAAAATAAGAAGAATTATGAAAATATGAAGAATCTTCCTGTTCTGCAAAATCAGCATCCGCCAAAAAGGGTGCGGTTAATGGAAAGTTCAGTAAAAAATCAGGTGCAAAAACCTAGTGAAGCAAACTATCTCGTCCAAGGCTGGCAAAGAGCAGAGCCGTGGAAGGGTTCTGTAGAAGTCCATCGGGCAAATGTCCATTGGGGTGGGAATTTCCAACCTTCTGCTATTTCTAGTTCTGATAATAAGGTGCATTATGGTTACAATCCAGGGACGGCTTCTTCTGCTTTTGCCCTAAATCCACTAGGTTATGAAGGATCTTATAATTTTCCCTTACAATCACATCTTGTTTCCCCTCTGAATTTCATGGGTTTTTCCCGAGCATTTCATCAAAAAGCAGTAGATCCAAACCCTTATTTGGGATCAATTAATTCAAACCTTCCTCCAGTGAGCCATAATCTACAACAGGGAGGGCCATACTACTCACATGCACAGAAGTGA 1980 0.4086 MQEENKKMKVKKGWLAVQVGLEEEDDGTTHKFVIPISYLYHPLFRRLLDKAYDVYGYHANGPLKLPCSVDDFLHLRWRIEKESTHSHSHHHHHHSHHHHLPHALYFHSYLKVMATGDIDLLKKAKKLESEELANVKFTPACFSGLDKLLRDAYAVRCPKPIDYYNRKDLVRIFNMIAKEIYGNSNSSPVVEGYGSFVMDMFSDGSDLDLSINFKNNSTEVPRQKKIETLRKFAKKLYSLQRKGIVGGVQTIMTARVPLLKVTDCGTGIECDLSVDNKDGIAKSHIIYAISTIDERFQKLSILMKSWAKAHNINCSKDRTLNSLSIVSLVAFHLQTRNPPILPPFSALLKEGANPAAVTKVVSKYFNYGKKNRESLAELLITLLVKLASVEKLWQEGLCASLFEGSWICKSWDSRSYSLSVEDFTDMSQNVARAVGTEEVKMIYRCIRESLKYFLDFLNGRMPETKLIDLLFGRHMVSTIGNQGAGHIDENQMNVKNKKNYENMKNLPVLQNQHPPKRVRLMESSVKNQVQKPSEANYLVQGWQRAEPWKGSVEVHRANVHWGGNFQPSAISSSDNKVHYGYNPGTASSAFALNPLGYEGSYNFPLQSHLVSPLNFMGFSRAFHQKAVDPNPYLGSINSNLPPVSHNLQQGGPYYSHAQK 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0455 659 Pfam Auxin responsive protein 6 78 IPR003676 GO:0009733
Dere03g0455 659 SUPERFAMILY Nucleotidyltransferase 140 290 IPR043519 -
Dere03g0455 659 Gene3D - 293 448 - -
Dere03g0455 659 PANTHER POLY A POLYMERASE CID PAP -RELATED 86 543 - -
Dere03g0455 659 SUPERFAMILY PAP/OAS1 substrate-binding domain 295 460 - -
Dere03g0455 659 CDD NT_PAP_TUTase 165 290 - -
Dere03g0455 659 Gene3D Beta Polymerase, domain 2 186 292 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0455 Dere-ChrDere03 8359580 8369190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0455 10 80 Calmodulin-binding Proteins AT3G43120 43.662 2.52e-10 57.8