LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere03g0450	ATGTGCCTGTATTTAGAATTTAAAAAAAACAAAAAAAGAATACATTCGCTCATATTCGAATCCATAGCTGCGAGGCGAACCAACATCGTCGAAGAAGAGATCGGAAAAGCCGCAATGTTGCAGACGAACGCTCACGCTCAAGCGCAGGCTCGCCGGAAAGGCATTGGAGTGAAAGTGTGGCTTGTGGTGTCTGAGACAGGGCAGTCGCACCTCGAGGAGGTTGAAAAGCAGTCCATCATGAGGCGTACCGGCTTGCCGGCACGTGATCTTCGTGCTCTGGATCCGATGTTGTCGTACCCGTCCTCCATTCTTGGACGCGAGAGAGCCATCGTTGTCAATTTGGAACACATTAAAGCTGTGATTACGGCCCAGGAGGTCCTCATGATCAATTCCTCTAATCCATTGTTTGTTCAATTTGTTCTTGATCTTCAGACTCGCATTTCTGGTTCTAATGGGCCGCCCCAACAGATGAACAAGGGCATGGATACTGAGTACGAAGCTGATCATCTGTCCCTTTCCTTACGCAGTCGTCATCATTCCCAAAAGAATTCAATCACAAGAACGTCCCAGAATGGTGATACTGTTTCTGACACGTCAGACATAGATGTAAAAGAGGATAGCCATAAGAGTACAGATGATGTGCCAATGGCCGCAGCTCATAAGCAGTTACCTTTTGAGTTTAGAGCACTTGAAGCTTGTCTCGAATCTGCTTGCAGGTGCCTTGAATCTGAGACACAAACATTGGAAGAAGAGGCCTACCCAGCACTTGATGAATTGACTTCTCAAATTAGCACACTCAATCTCGATCGCGTTAGACAGATTAAGAGTCGTCTGGTTGCACTTTCTGGTCGTGTGCAGAAGGTAAGAGACGAACTCGAGCATTTGTTGGACGATGACAATGACATGGCTGAAATGTACTTGACACAAAAGCTTGTTTCTCGCTCTTCGGATCAAGCATCGCCAAGAGAAGTTTCTTCAGTTGAAGAAGATGAACAAAGAGCTGAAGATTCAAATTCAGAACACTCCGATATTTATACTACTGTTAAGCCTGACGTTGAGGAATTGGAGATGCTTATAGAAGCATATTTTGCACAGATAGATGGCATATTGCAAAAACTGTCCGATATGAGTGAGTACGTGGATGACACAGAGGATTGCATCAACATAATGTTGGATGATAAGCAGAATCAGCTACTACAGGTGGGAGTAATACTCAACACGGCGAACATGATACTTAATGCCGGCATCGTGGTTGTAGGTCTGTTTGGCATGAATATTCATATCAGTCTCTTTGATGGTACAAATAGACAATTCTGGGAAACTGCGTTGGGTACATTAGGAGGCTGTGTCGGATTATATGTTGTTGCTGTTGGATGGGGTAAGAAGAGATATTTGTTGCCTTCGTAG	1407	0.4471	MCLYLEFKKNKKRIHSLIFESIAARRTNIVEEEIGKAAMLQTNAHAQAQARRKGIGVKVWLVVSETGQSHLEEVEKQSIMRRTGLPARDLRALDPMLSYPSSILGRERAIVVNLEHIKAVITAQEVLMINSSNPLFVQFVLDLQTRISGSNGPPQQMNKGMDTEYEADHLSLSLRSRHHSQKNSITRTSQNGDTVSDTSDIDVKEDSHKSTDDVPMAAAHKQLPFEFRALEACLESACRCLESETQTLEEEAYPALDELTSQISTLNLDRVRQIKSRLVALSGRVQKVRDELEHLLDDDNDMAEMYLTQKLVSRSSDQASPREVSSVEEDEQRAEDSNSEHSDIYTTVKPDVEELEMLIEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDKQNQLLQVGVILNTANMILNAGIVVVGLFGMNIHISLFDGTNRQFWETALGTLGGCVGLYVVAVGWGKKRYLLPS	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere03g0450	468	Coils	Coil	278	298	-	-
	Dere03g0450	468	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	45	464	IPR039204	-
	Dere03g0450	468	FunFam	Magnesium transporter MRS2-E	167	398	-	-
	Dere03g0450	468	MobiDBLite	consensus disorder prediction	198	214	-	-
	Dere03g0450	468	MobiDBLite	consensus disorder prediction	176	214	-	-
	Dere03g0450	468	MobiDBLite	consensus disorder prediction	312	343	-	-
	Dere03g0450	468	Gene3D	Magnesium transport protein CorA, transmembrane region	136	398	-	-
	Dere03g0450	468	FunFam	Magnesium transporter MRS2-1	48	131	-	-
	Dere03g0450	468	Coils	Coil	231	251	-	-
	Dere03g0450	468	CDD	Mrs2_Mfm1p-like	60	463	IPR039204	-
	Dere03g0450	468	MobiDBLite	consensus disorder prediction	323	343	-	-
	Dere03g0450	468	MobiDBLite	consensus disorder prediction	177	197	-	-
	Dere03g0450	468	Gene3D	-	45	132	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere03g0450	Dere-ChrDere03	8266550	8270395	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere03g0450	59	466	MRS2 Gene Family	AT3G19640	49.782	2.04e-131	387