Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0437 ATGGGTAAGGAAAATCTTTCAGAAACAGTAAAGGAAGAAGTCAGTGATGATGGCTCCTCAAATGTTAAGATCAAAGATCTAGAATCTGACTCTCAAGATAGTCTGGAGGAGACAGGCTGTGCAAGTTGTCGTGTGTGCCAATGTGTTGAATCTGATAAAAGGGGAGATGCAGCGCTAGAATTTTTGGGCATTGCTCCAGTAATAGAAGCGTGTAAAAGTAACAAGGAAGTAAGTGCTGATGGCGAGGAAATTCCAAAAGATGTGTCAAATGTTGGAAGTAAGTCTGGGATGATGGAGTTTGTAAGCCCTGACGGGGAGGTTTTTATTTGCAACACCAATTTGGAAATGGGTTTGTCTCATCGTGACACATTAGTTGAACTTGGTTGTTGTTGTAAAAATGACCTTGCTTTAGTACATTATGCTTGTGCACTCAAATGGTTTGTCAACCATGGATCCATCATTTGTGAAATATGTGGTCATTTGGCAAACAACATCAGAATTTCTGACTTCGACAAGGTTGTTGCTTCTTTGAAGGAGTATGAAGCATTGAGGGAAAGAACTGCCAGTTGGGAGTCCCATCCTGCTCAAGTTCATGCCAATACTGGTTTGGATCCTGATGCTGTTGCTGCTATCCGAAGGCAACAGCTAAGTGAGATTGCACTATGGTTTTGCCCGCTTAATAGCAGTAACAATCACAACAATAACAATGCAGACACAGTTCTACAGGTTTTTTCTGAACAACCTTTAAATACTGCTTTTGAAGATGCCACCCCTGCTCAAAATCCTGCAACTAAGTGGGCCATAGAAGGTACTGGGATTCTGCTTGCTACTGGGCTGCTCACTATAACCCTTGCATGGCTTATTGCTCCTCGTGTGGGAAAGAAAACTGCTAAAAATGGTCTTCATATCCTACTTGGCGGCATTTGTGCTTTAACAGTCGTGGTCTTCTTCCGCTTTTTCGTGCTTACCAGAATCAAGTATGGACCTGCACGTTATTGGGCAATCTTGTTCGTTTTCTGGTTTCTCGTATTTGGAATATGGGCTTCACGAACACACAGTGCTCATACAACGTAA 1074 0.4236 MGKENLSETVKEEVSDDGSSNVKIKDLESDSQDSLEETGCASCRVCQCVESDKRGDAALEFLGIAPVIEACKSNKEVSADGEEIPKDVSNVGSKSGMMEFVSPDGEVFICNTNLEMGLSHRDTLVELGCCCKNDLALVHYACALKWFVNHGSIICEICGHLANNIRISDFDKVVASLKEYEALRERTASWESHPAQVHANTGLDPDAVAAIRRQQLSEIALWFCPLNSSNNHNNNNADTVLQVFSEQPLNTAFEDATPAQNPATKWAIEGTGILLATGLLTITLAWLIAPRVGKKTAKNGLHILLGGICALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHSAHTT 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0437 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 168 IPR013083 -
Dere03g0437 357 MobiDBLite consensus disorder prediction 1 32 - -
Dere03g0437 357 MobiDBLite consensus disorder prediction 1 34 - -
Dere03g0437 357 SUPERFAMILY RING/U-box 124 161 - -
Dere03g0437 357 ProSiteProfiles Zinc finger RING-CH-type profile. 99 165 IPR011016 GO:0008270
Dere03g0437 357 SMART ringv_2 109 159 IPR011016 GO:0008270
Dere03g0437 357 PANTHER ZINC FINGER, RING-CH-TYPE 15 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0437 Dere-ChrDere03 8151073 8154466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0437 1 347 C3H Transcription Factor Family AT5G08750 63.483 1.98e-151 429