Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0421 ATGTCTGGAAAGGGGAAGAGGAAGGACCAGCAGGAATACGCTTCCGACGGCGATTCTGAGGGCCACGCGCCGCCCAAAAAATTCTCTAAGAAAGATTCCGATGATTCTGATGACATCGTTGTCTGCGAGATATCCAAAAACAGAAGGGTGTCCGTGAGGAACTGGCAAGGCAAGGTTGTGGTGGATATTCGGGAATTTTACGTGAAAGACGGGAAGCAATTGCCTGGCAAGAAAGGTATCTCACTGACCATGGACCAGTGGAAAGTACTTCGGGATCATGCTGAAGAAATTGACAAGGCAGTGAATGAGGAGTCGTAG 318 0.4906 MSGKGKRKDQQEYASDGDSEGHAPPKKFSKKDSDDSDDIVVCEISKNRRVSVRNWQGKVVVDIREFYVKDGKQLPGKKGISLTMDQWKVLRDHAEEIDKAVNEES 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0421 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
Dere03g0421 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 18 103 IPR045125 GO:0003713|GO:0060261
Dere03g0421 105 MobiDBLite consensus disorder prediction 1 36 - -
Dere03g0421 105 FunFam Putative transcriptional co-activator 32 105 - -
Dere03g0421 105 Gene3D Transcriptional Coactivator Pc4; Chain A 30 105 IPR009044 GO:0003677|GO:0006355
Dere03g0421 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0421 Dere-ChrDere03 7992759 7994642 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Dere03g0421 PC4 3.9e-26 CL0609