Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0417 ATGAAGTTGACTGGAGACAGTACCGCGGCGGATGGTGGCGCCGGTGACAGTGGTGGAGGTCGGACGCTCTTGGTTGGGGTGAAGTTGGATCCTCGGAGCCGGGAGTTGCTCACGTGGGCTCTCGTCAAGGTGGCGGAGCCTGGTGACCTTGTCATTGCGCTTCACGTTTTGGACACTATCACTGAGGGTACGGGATCGCTTCTCTCTCTTGTAAATACTTTTGATTCTGTTCTAGCCGTTTACGAAGGTTTCTGCAACTTGAAGCAGGTTAATCTCAAGCTTAAAGTATGTAGAGGTGCGTCGACTCGGAAACTTCTAGTGCAGGAGGCGAAATCGTTTGGTGCAGCTACAGTAATTGTGGGAACTGCTAAAACCCATCACACAATCCGGTCATCGGCATCCGTTGCAAAGTACTGCGCAAAGAAATTGCCCAAGTGTATCTCTGTCTTCGCGGTTGACAATGGCAAAATTGCCTTCCACAGAGAGGCTAGTAAACTATGTGCTGGTCAAGAAAAATTAAACGAACGCCCAACTTTGTCAAGAAAATCCTTCAAGGCTTGTACAAAGAAAAATATAAACAATTGTGAAAGTTGTGCGCGGGTGTTAGCACTGCCAGATAGAGCTGCAACTGAAGCTTTGCCTGATGATCACGAAAAGGAAGATTCACTGGCTTTAGTGACGCTCCAAAAACTTGATGATAGTCCAGGTTATGCAACTGTGGTTCAGGTTTCAAACCAGTCTAAACCTGGTTGGTCAGTCCTTCGGCAGGTATTTCTGCCCAAAAAGAACATGCAGAAATCATATGTGAGCAATGCATATGTTTTTCAACGGGCAGTTAAACAGACCAGCTGGCATTCGTTAGCTGTAGTCCATCCAGATCAGAAACAGATTAATATTGACAAGAATGACAGTACTACCCTTGATGGGGAGAGTGGTGCCATTGTGCCTTTTGGATCTACTGCGAACTCTGATTTGGTTGACCTTCCTAAAGAATTGTTCAGCTTACAAGAGAAATGCTCATCTTTCTGTAGAGTGTATAATTTCCAGGAACTTGCATCTGCAACAGCTAACTTCTCGCCTGAAAATTTGGTTGGCCAAGGTGGTTGTAGTCATGTTTATAGAGGATGTCTTCCTGATGGCAAGGAGTTGGCAGTGAAAATTTTGAAGCCATCAGAAGATGTGCTTAAAGAATTTATGTTGGAAATTGAGATCATTACTACTTTGCATCATAAGAACATAATATCTCTATCTGGGTTTTGTTTTGAGGGCACCAATTTACTATTGGTTTATGATTTTTTATCAAGAGGAAGCCTAGAAGAGAACATTCATGGTAATAAGAAGGACTGTAATGTATTTGGTTGGCAAGAGAGGTATAAGGTGGCCGTGGGTATTGCCGAGGCTTTGGACTTTCTGCATAATGGCTGCGCACAGGCTGTGATCCATAGGGATGTAAAATCTTCAAACATCCTTCTATCAGATGATTTTGAGCCTCAGCTCTCTGATTTTGGACTGGCCAGTTGGGGTTCTTCTTCATCCAATGTTACTTGTACTGATGTGGCCGGAACCTTTGGATACCTTGCTCCAGAATACTTTATGCATGGTAAGGTAACTGACAAAATTGATGTATATGCTTATGGTGTTGTTCTCCTTGAGCTTCTCTCTGGCAGGAAGCCCATCAACAATGAATGCCCGAAGGGCCAGGAGAGCCTTGTGATGTGGGCAACACCCATTCTAAAGGGTGGGAAGCTTTCCCAGTTGCTTGATTCAAGTATAGGCGGCAATCCCGAACATCAGCTGATTGAAAGAATGGTTCTGGCTGCTACCCTTTGCCTTAGACGAGCACCTAGATTTCGACCTCAAATCAGCACTATATTGAAACTTCTGCTTGGTGATGAAGAAGTGACAAGATGGGCAAAACAAGAAGTTAGTGCACCAGAAGCACTTGATGGCTTTGATGGGGAACCAAATAATATTCAGTCCCATCTGAACCTCGCGTTGCTGGACTTGGAGGATGATACAGTTTCTATCAGTAGTTCTGAGCAGAGTGTCTCACTCGAGGACTATTTGCATGGAAGATGGAGTCGCTCGTCCAGTTTTGATTGA 2103 0.4465 MKLTGDSTAADGGAGDSGGGRTLLVGVKLDPRSRELLTWALVKVAEPGDLVIALHVLDTITEGTGSLLSLVNTFDSVLAVYEGFCNLKQVNLKLKVCRGASTRKLLVQEAKSFGAATVIVGTAKTHHTIRSSASVAKYCAKKLPKCISVFAVDNGKIAFHREASKLCAGQEKLNERPTLSRKSFKACTKKNINNCESCARVLALPDRAATEALPDDHEKEDSLALVTLQKLDDSPGYATVVQVSNQSKPGWSVLRQVFLPKKNMQKSYVSNAYVFQRAVKQTSWHSLAVVHPDQKQINIDKNDSTTLDGESGAIVPFGSTANSDLVDLPKELFSLQEKCSSFCRVYNFQELASATANFSPENLVGQGGCSHVYRGCLPDGKELAVKILKPSEDVLKEFMLEIEIITTLHHKNIISLSGFCFEGTNLLLVYDFLSRGSLEENIHGNKKDCNVFGWQERYKVAVGIAEALDFLHNGCAQAVIHRDVKSSNILLSDDFEPQLSDFGLASWGSSSSNVTCTDVAGTFGYLAPEYFMHGKVTDKIDVYAYGVVLLELLSGRKPINNECPKGQESLVMWATPILKGGKLSQLLDSSIGGNPEHQLIERMVLAATLCLRRAPRFRPQISTILKLLLGDEEVTRWAKQEVSAPEALDGFDGEPNNIQSHLNLALLDLEDDTVSISSSEQSVSLEDYLHGRWSRSSSFD 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0417 700 PANTHER OS08G0249100 PROTEIN 73 652 IPR046958 -
Dere03g0417 700 FunFam Putative receptor-like serine/threonine-protein kinase 433 644 - -
Dere03g0417 700 Pfam Universal stress protein family 21 145 IPR006016 -
Dere03g0417 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Dere03g0417 700 Pfam Protein kinase domain 361 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0417 700 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 327 432 - -
Dere03g0417 700 SUPERFAMILY Protein kinase-like (PK-like) 339 628 IPR011009 -
Dere03g0417 700 Gene3D HUPs 21 154 IPR014729 -
Dere03g0417 700 CDD USP_Like 22 147 - -
Dere03g0417 700 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
Dere03g0417 700 SMART serkin_6 358 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0417 700 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 145 - -
Dere03g0417 700 Gene3D Transferase(Phosphotransferase) domain 1 433 645 - -
Dere03g0417 700 Gene3D Phosphorylase Kinase; domain 1 328 432 - -
Dere03g0417 700 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0417 Dere-ChrDere03 7965011 7968294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0417 346 628 Trihelix Transcription Factor Family AT1G70460 42.708 2.14e-72 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dere03g0417 Pkinase 4.3e-42 CL0016