Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0394 ATGGGATCGGAAAACAAAGCGAGTAGAAGAAAAGAGGTTGAAGCAATGAAGAAACAAGGGTGTGAGGTTGAAGCAATAGGCATCAACTACAAGATCCGCACACAAAAAACAGAGCACCCTTTTAAAATCTTTAGCAAATCCCCACAACAGATCAACCAAGAAAATGGCCAAGAACCAGAAGAGGAGGAAGCAAAACCTGATCAAGCATACAGTGGTGGAGTGAGGCATGTCCTCAAGGACGTGAGCTGCCGAGCCAAGCCGCAGGAAATTCTCGCCATTGTTGGGCCAAGCGGAGCTGGAAAATCATCACTGCTTGAGATTCTTGCTGGTAAAATTACCCCCCAAAGTGGGTCTATCGCGGTGAACCAGAAACCTGTAGATAATGCTCAGTTCAGAAAGATTTCAGGGTACGTTACACAAAAAGATACTCTGTTTCCCTTACTTACGGTTGAAGAAACCTTGATGTTCAGTGCAAAGCTAAGGCTAAAGCTTCCTCAAGATAAACTCTGCTTCAGGGTCAAGACACTGATTCAGGAGCTAGGACTCAGCCATGTCGCTAAGACTAGAATTGGAGATGACAGGGTCCGTGGGATATCCGGTGGTGAGAGACGCCGAGTTTCTATTGGTGTTGAAGTCATACACGACCCCAAAGTGGTGATTCTGGATGAACCAACTTCTGGGCTTGATAGTACCTCTGCTCTGCAGATCATTGATATGCTAAAGGTCATGGCTGACTCAAGGGGCCGAACTATAATCCTCAGTATCCATCAACCTGGGTTCAGAATTGTAAAGTTGTTCGATTCTATATTGTTGTTAGCCAGTGGTCGTGTGTTACACCATGGGACTGCGGATTTGCTGGGTGTAAATCTAAGATTAATGGGTTTAGAACTTCCTCTTCATGTAAATGTAGTTGAATTTGCCATTGAGTCTATAGAATCCTTTCAGCAACGGCAAAAATGTCAGCAAGTCCAATTAGAAACGCCACCACAATTGCCAGCAACAATGCAGCAAAAGAAAGGTGACGTTCAGGGTGAGAGTAGAAGTGGTAAGTTTACTCTGCAGCAGCTCTTTCAACAATCAAAGGTAATTGATGAAGAAATCATCAATGCGGGAATGGATTTCACTTGTGACTTTGCAAATTCTAGATTGAAAGAAACTATGATTCTCAGTCATAGGTTTTCCAAAAACATCTTCCGTACAAAGGAGCTCTTTGCATGTAGGACGATTCAGATGCTGATTTCTGGACTCGTTTTGGGGTCCATCTTTTGTAATCTCAAGGATGATCTAGTGGGTGCTGAAGAACGGGTAGGTCTATTTGCTTTCATATTAACGTTTTTGTTATCAAGCACCATAGAAGCTCTCCCAATTTTTCTACAAGAAAGGGAGATTCTGATGAAGGAGACCTCTTGTGGAAGCTACAGAGTATCATCTTATGCTATTGCTAATGGCCTAGTTTACCTGCCATTTCTACTCATCTTAGCCATTTTATTCACAGTACCCTTATACTGGCTAGTTGGGCTCAACCGGAATTTCTCAGCTTTTTTGCACTTTTTGTGGCTGATTTGGTTAATTCTTTACACGGCAAATTCAGTTGTGGTGTGTTTCAGCGCTCTGGTGCCTAATTTCATTGTCGGGAACTCAGTGATCGCTGGTGTCATGGGATCATTCTTCTTGTTCTCTGGCTACTTCATATCAAAACATGAAATTCCAAATTACTGGATTTTCATGCATTATATATCTCTGTTTAAGTATCCCTTCGAAGGGTTTCTGATTAACGAGTTTTCCAACTCAGGTAAGTGCTTGGAGTACATGTTTGGGGCATGTGAGGTGACTGGAGAGGATGTGCTTAAAGAAGAAGGATATGGGGGCGAAAGTAGTAAATGGAAGAATGTTGGGGTCATGGTGTGCTTCATCCTGTTTTACAGGTTCATTTCCTATGTGATTCTTAGATATAGATGCTCGCTGAGGACCTCCTATAGTGTCATCATATGA 1992 0.4267 MGSENKASRRKEVEAMKKQGCEVEAIGINYKIRTQKTEHPFKIFSKSPQQINQENGQEPEEEEAKPDQAYSGGVRHVLKDVSCRAKPQEILAIVGPSGAGKSSLLEILAGKITPQSGSIAVNQKPVDNAQFRKISGYVTQKDTLFPLLTVEETLMFSAKLRLKLPQDKLCFRVKTLIQELGLSHVAKTRIGDDRVRGISGGERRRVSIGVEVIHDPKVVILDEPTSGLDSTSALQIIDMLKVMADSRGRTIILSIHQPGFRIVKLFDSILLLASGRVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIESFQQRQKCQQVQLETPPQLPATMQQKKGDVQGESRSGKFTLQQLFQQSKVIDEEIINAGMDFTCDFANSRLKETMILSHRFSKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDDLVGAEERVGLFAFILTFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLVGLNRNFSAFLHFLWLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVMGSFFLFSGYFISKHEIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGACEVTGEDVLKEEGYGGESSKWKNVGVMVCFILFYRFISYVILRYRCSLRTSYSVII 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0394 663 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 63 299 IPR003439 GO:0005524
Dere03g0394 663 Pfam ABC transporter 78 226 IPR003439 GO:0005524
Dere03g0394 663 FunFam ABC transporter G family member 5 62 323 - -
Dere03g0394 663 MobiDBLite consensus disorder prediction 39 71 - -
Dere03g0394 663 MobiDBLite consensus disorder prediction 41 55 - -
Dere03g0394 663 Pfam ABC-2 type transporter 386 594 IPR013525 GO:0016020|GO:0140359
Dere03g0394 663 Gene3D - 67 338 IPR027417 -
Dere03g0394 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 283 IPR027417 -
Dere03g0394 663 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524|GO:0016887
Dere03g0394 663 SMART AAA_5 87 284 IPR003593 GO:0016887
Dere03g0394 663 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0394 Dere-ChrDere03 7624829 7626820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0394 83 328 Calmodulin-binding Proteins AT2G36910 24.419 5.85e-11 63.9