Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0392 ATGAGAGGTGAAAGCATGAATCTCCCACCTGGCTTTCACTTCTCTCCAACAGATGAAGAACTTCTCCTCCACTTTCTTCATCCAAAGGCTTCTCTTCTACCCTCCCATCCCAATATCATCCCTGACCTTGATCTCTCTCTCTTTCACCCTCTCCAACTTAATGGGAAGGCGTTGTCAAGTGGAAACCAATTCTATTTCTTCACAAAATTTAAGAAGAACAGAGTGACAGAAAGTGGGTATTGGAAGGAAACAGGCGTGACTGAATCAATAGTCTCTTCTGCTGGTAAGAAAGTTGGAATGAAGAAATATTTAGTGTTCAACAATGGAGAAGCTCCTCAAGGTACTGAAACCAGCTGGATAATGCAAGAGTATCATCTTGGCTCTTCTGGGTTTAACTCTGCGTCCAATACAAGCACTCGAGGAACACGAAAACCTGATGGAAGCAAATGGGTGCTATGCCGAGTCTATGAAAAGAAGGGAGATTCTGAAGACGATGATGAGGGCGGAATCAGTACAGAGCTATCGTGGATGGACGAAGTGTATATGTCGTTGGATGATGATGGTGAAGAAATTAGCTTCCCTTAG 585 0.4359 MRGESMNLPPGFHFSPTDEELLLHFLHPKASLLPSHPNIIPDLDLSLFHPLQLNGKALSSGNQFYFFTKFKKNRVTESGYWKETGVTESIVSSAGKKVGMKKYLVFNNGEAPQGTETSWIMQEYHLGSSGFNSASNTSTRGTRKPDGSKWVLCRVYEKKGDSEDDDEGGISTELSWMDEVYMSLDDDGEEISFP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0392 194 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Dere03g0392 194 PANTHER NAC TRANSCRIPTION FACTOR 56 6 165 - -
Dere03g0392 194 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Dere03g0392 194 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Dere03g0392 194 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0392 Dere-ChrDere03 7606620 7607435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0392 8 182 NAC Transcription Factor Family AT1G69490 40.541 1.22e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere03g0392 NAM 2.6e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0392 03 7606620 7607435 Dere03g0392 03 7606620 7607435 ECH