Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0381 ATGCAAGGTGCTTACGGTGTTTGTAGTAAGAAAGTCGGAGATGATGATTCAAGCCGGGCTTCTTTTGTCATAATTCCCTTCAATATCATAAAAGCAATTCTCAATTTTATTCTTTGTTTAGCTTTGCACCAGCTAGTAAATACGTGGTATGATATGAACTCTTCTTCTTTCACTCGCTTCTCTGAGCGTCTAGTTGCGCCTCTCTACTCTACGGCTCCTTCCAGGAGCAATAGGACGGATAGTATTGCTATCGAGGGTCGTAACCTCAATTTCTCGTTCACCACAAGGCAGGAGAACGCTGTACCGGTTCTTCGGGATTGTTCATTTCGCATTCCTTCGGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGCGGAAAATCTACCCTCTTGAAGATCTTGGCTGGTCTTTTGAATCCAACATCAGGAACAGTGTACGTGAATGGGCCTAAAAGTTTCGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACAGTAGAATCTGACGTAGCATTTGGTCTTGGTAAGTTCAACTTGACCCATGATGAAGTCAGATCACGGGTGTCTAGAGCCTTGCATGCTGTGGGCTTGTCTGACTACATGCAGAGATCTGTCCAAACTCTAAGCGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTAGCAGAAGCTTGTAGAGTTCTGTTGTTGGATGAGCTCACAACGTTCTTAGATGAAAATGACCAGGTCGGAGTTATCAAAGCGGTAAGGAACTCTTTGGATACCTCTGCAGAGGTTACGGCATTGTGGGTCACTCATCGTTTGGAAGAACTGAAGTTTGCTGATGGTGCCATCTACATGGAGGACGGTAAAGTTGTGATGCATGGAGAAGCTGCAAACGTAAGAAGTTTCATTGATGCTAGGCAATCCCACTATATCAAGCAGATAAATTCTTGA 942 0.4501 MQGAYGVCSKKVGDDDSSRASFVIIPFNIIKAILNFILCLALHQLVNTWYDMNSSSFTRFSERLVAPLYSTAPSRSNRTDSIAIEGRNLNFSFTTRQENAVPVLRDCSFRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVYVNGPKSFVFQNPDHQVVMPTVESDVAFGLGKFNLTHDEVRSRVSRALHAVGLSDYMQRSVQTLSGGQKQRVAIAGALAEACRVLLLDELTTFLDENDQVGVIKAVRNSLDTSAEVTALWVTHRLEELKFADGAIYMEDGKVVMHGEAANVRSFIDARQSHYIKQINS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0381 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 301 IPR027417 -
Dere03g0381 313 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 84 309 IPR003439 GO:0005524
Dere03g0381 313 SMART AAA_5 113 276 IPR003593 GO:0016887
Dere03g0381 313 CDD ABC_cobalt_CbiO_domain1 85 286 IPR015856 GO:0005524|GO:0016020|GO:0055085
Dere03g0381 313 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524|GO:0016887
Dere03g0381 313 Gene3D - 79 312 IPR027417 -
Dere03g0381 313 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 84 297 - -
Dere03g0381 313 Pfam ABC transporter 104 236 IPR003439 GO:0005524
Dere03g0381 313 FunFam ABC transporter I family member 10 80 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0381 Dere-ChrDere03 7521509 7527754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0381 84 291 Calmodulin-binding Proteins AT2G36910 30.088 1.52e-22 96.7