Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0376 ATGGCTATAACAAAATTGATTCCTGGATTTCGGTTTCATCCGACTGACGTTGAGCTCCTTAGATTCTTTCTGAAAAGGAAGGTTATGGGAAAGAAATTCTCGTATGATGTGATTGCAGAAGTCGACATATACAAGTACGCTCCATGGGATCTCCCTGATAAATCTTGTTTGAGAACTGGGGATTTGGAATGGTACTTCTTTTGTCCTAGAGAAAAGAAATATGCCAGTGGGGTCAGAATAAATCGTGCTACGGAATTCGGGTACTGGAAAACTACCGGGAATGATAGACCTGTTCGTTACAAGAATCAAACCGTGGGGATGATAAAAACCCTGGTATTTCACAGAGGTAAAGCTCCTCGAGGAGACAGAACTGATTGGGTCATGCATGAATTTAGACTCGAAGATAAGGATCTGACTGATAAAGGCATTCCGCAGGATTCCTATGTGCTTTGTAAGGTCTTCCAGAAAGATGGTCCTGGTCCCAGAAATGGTGCACAGTATGGAAAACCATTCAATGATGAAGACTGGGATAATGATGAGGAAATTGATGTTGTAGGATCTATCCCTCTAGTTGCTGTGTCTGCACCAATTCCCATTCTTCCTGATACACTTGGCAGCTCTATTGCAACTGACATTCACCCCCCTGCAAGTGGATGCATTGGGTCATCATCCGAGTCATGCCTTTCTAGAGTCATGCCTTCTCCTTGTCTTGTGCAACCTTCAGTTCCAACCGACCAAGTTATATCCAATGATGGATCTCAAATTCCAGTTGATGATGATATTGTTGCACTTTTGGATCATTTCACGGAGGATAACCCAGTGGCTTTGAATGAAAACGACATTGAGATGATTGATAATTCTGGTCAGGAAAAGGATGCTGTAGTCGAACCTTGTTTGGATTTTAATGATATTTTCAAGGATTTGGGAGACCTTGACATGGCTGGATGGGTTGATGGACATAACTTTTCCTGTGGCCAGAAAGCTGAATACAATACAAACCAAATGTTTCCTCCGGGTAGCATGGGCTCAAGGTTCAGTGACCCTGACTTTTTGGAGTTGCATGACCTAGACTCTCCATTGTTCCGGCAGTCTGAACAACATGAAAGTTGGGGTCCATTTGATCCAGGAAAGGGCGGTTTGTGA 1143 0.4322 MAITKLIPGFRFHPTDVELLRFFLKRKVMGKKFSYDVIAEVDIYKYAPWDLPDKSCLRTGDLEWYFFCPREKKYASGVRINRATEFGYWKTTGNDRPVRYKNQTVGMIKTLVFHRGKAPRGDRTDWVMHEFRLEDKDLTDKGIPQDSYVLCKVFQKDGPGPRNGAQYGKPFNDEDWDNDEEIDVVGSIPLVAVSAPIPILPDTLGSSIATDIHPPASGCIGSSSESCLSRVMPSPCLVQPSVPTDQVISNDGSQIPVDDDIVALLDHFTEDNPVALNENDIEMIDNSGQEKDAVVEPCLDFNDIFKDLGDLDMAGWVDGHNFSCGQKAEYNTNQMFPPGSMGSRFSDPDFLELHDLDSPLFRQSEQHESWGPFDPGKGGL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0376 380 FunFam Nac domain-containing protein 86 15 159 - -
Dere03g0376 380 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Dere03g0376 380 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Dere03g0376 380 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 189 - -
Dere03g0376 380 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Dere03g0376 380 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0376 Dere-ChrDere03 7437570 7440167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0376 1 378 NAC Transcription Factor Family AT5G09330 45.269 1.24e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere03g0376 NAM 2.1e-34 No_clan