Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0365 ATGACCACTCTTCCCAGGAAAAACACCACCTTTTTCCCCTTCTCTCTCTCAAGATCTACCTTCCTCCTCTTTTCCATGGCTTCTCTTCTTTCCCTTTCCCTCTTCTCCTTCTTCCTCTTCCTTGCTCTCTCTTCCGCCGCTCGCCACCACCGCCAACCCCCCACGTCGGCCGCCCCTTCCTCTCTTATCCAAAACGCCTGTAAGGCCACTCGCTTCCCTCAACAATGCCAGTCTTCTCTCACGAACCTTCCCCCCGACGCCACACCCGTTCAAATCCTCCAATCTGCCATGGCTATCTCCTCCAACAACCTCAAGACCGCCCTATCCAAGGTCAAGTCCATCCTCGACTCCTCCAAATCCAGTATCAATCGCACCACCGCTTCTAATATTTGCATCGAGGTACTCGGTGGCTCTGACTACCGCATCGGTCTCGCTAATGACGCGCTACCGCGTGGCAGGACCAAGGACGCTCGCGCGTGGATGAGTGCCGCGCTGCTCTACCAGTACGATTGCTGGTCCGCTTTGAAGTACGCCAACGACACCCGTATGGTGGGCGAGACGATGGCCTTCTTGGACTCCCTCATTGGGCTTTCCAGCAACGCGTTGAGCATGATAGCGGCGTACGATGTGTTAGGAAAAGACACTGCGTCGTGGAGGCCACCCTTAACGGAACGCGACGGGTTCTGGGAGGCATCCGGATCGGGTCCCGGCTCCGGGTTGGGGTTTAGGGGCGGGTTCCCGACGAAAGTGAAACCGGACGTTACGGTGTGTAAGGATGGTGGGAATGGGTGTTACAAGACGGTGCAGGAGGCTGTTAACGCTGCTCCGGATGACGCCGGCGACAGAAAGTTCGTGATATACATACAGGAAGGTGTTTATGAGGAGACGGTGAGGGTTCCGTTACAGAAGAAGAATGTGGTGTTTTATGGGGACGGAATGGGTAAGACCGTCATCACCGGGTCCGCTTATGCGGATAAACCCGGAGTCACGACCTACACCTCAGCTACTGTTGCGGTTATGGGTGATGGATTCATGGCGAAGGCGCTCACATTCCAGAACACAGCAGGCCCTAACTCTCATCAAGCAGTGGCCTTAAGATCAGACAGCGATCTCTCTGTGTTTGAGGAATGTGAATTTATAGGCAATCAAGATACTCTATATGCTCACGCCCTCCGCCAATTTTACAAATCATGCCGCATCCTTGGCAATGTGGACTTCATCTTTGGGAATTCAGCTTCCATCTTCCAAGATTGCCAAATCCTAGTCCGTCCCCGGCAAGTGAAGCCTGAAAGTGGCGAGAATAATGCTGTCACCGCACATGGCAGGACAGACCCTGCTCAATCGACTGGCTTTGTTTTCCAGAACTGCTTGATAAATGGGACTCAGGAATATATGGTTTTGTACCATAGCAAGCCTCAGAAACACAGGAATTTCTTGGGGAGGCCATGGAAGGAGTACTCAAGAGTAGTTTTCATTCGTTCTTTCTTGGAAGTTCTCATAACACCATCGGGTTGGCTTCCATGGAGTGGTGATTTTGCGCTGAAGACGCTTTACTATGGAGAATTTGAGAATACTGGACCTGGTTCTAACTTGGCTGAGAGAGTACCCTGGAGTAGTAAGATCCCACCTGAGCATGTGTCCACATATTCAGTTCAGAATTTCATTCAAGGAGATGAGTGGATTCCATCATCTCTCATTAGCTCCTTGGATTTGTCATAG 1719 0.5183 MTTLPRKNTTFFPFSLSRSTFLLFSMASLLSLSLFSFFLFLALSSAARHHRQPPTSAAPSSLIQNACKATRFPQQCQSSLTNLPPDATPVQILQSAMAISSNNLKTALSKVKSILDSSKSSINRTTASNICIEVLGGSDYRIGLANDALPRGRTKDARAWMSAALLYQYDCWSALKYANDTRMVGETMAFLDSLIGLSSNALSMIAAYDVLGKDTASWRPPLTERDGFWEASGSGPGSGLGFRGGFPTKVKPDVTVCKDGGNGCYKTVQEAVNAAPDDAGDRKFVIYIQEGVYEETVRVPLQKKNVVFYGDGMGKTVITGSAYADKPGVTTYTSATVAVMGDGFMAKALTFQNTAGPNSHQAVALRSDSDLSVFEECEFIGNQDTLYAHALRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAHGRTDPAQSTGFVFQNCLINGTQEYMVLYHSKPQKHRNFLGRPWKEYSRVVFIRSFLEVLITPSGWLPWSGDFALKTLYYGEFENTGPGSNLAERVPWSSKIPPEHVSTYSVQNFIQGDEWIPSSLISSLDLS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0365 572 CDD PMEI-like_3 66 209 - -
Dere03g0365 572 PANTHER PECTINESTERASE 38 562 - -
Dere03g0365 572 SUPERFAMILY Pectin lyase-like 250 566 IPR011050 -
Dere03g0365 572 SMART PMEI_2 58 204 IPR006501 GO:0004857
Dere03g0365 572 FunFam Pectinesterase 247 570 - -
Dere03g0365 572 NCBIfam pectinesterase inhibitor domain 31 206 IPR006501 GO:0004857
Dere03g0365 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 206 IPR035513 -
Dere03g0365 572 Pfam Plant invertase/pectin methylesterase inhibitor 61 204 IPR006501 GO:0004857
Dere03g0365 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 207 IPR035513 -
Dere03g0365 572 Gene3D - 247 569 IPR012334 -
Dere03g0365 572 Pfam Pectinesterase 253 558 IPR000070 GO:0030599|GO:0042545
Dere03g0365 572 FunFam Probable pectinesterase/pectinesterase inhibitor 51 61 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0365 Dere-ChrDere03 7312119 7314429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0365 56 560 Carbohydrate Esterase AT5G09760 66.992 0.0 715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0365 03 7312119 7314429 Dere03g0365 03 7312119 7314429 ECH