Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0353 ATGAGTATGGTGGGAGCTGAAAGCTCAGAGGAGTGTACTGGGCTTGCAGAGCCTCCGGATCCTGACATTCTTGAAATTGATCCAACTTGTCGCTACATTAGATATAAAGAGGTGATCGGCAAAGGTGCTTTCAAGACATGTTACAAGGCATTTGATGAGGTCGATGGAATTGAAGTGGCCTGGAACCAGGTTCAAATTGATGAGGTGCTGCAGTCACCAGGGGACCTAGAAAGGCTCTACTCAGAAGTGCATCTCTTAAAATCATTGAAGAACAATAATATAGTCAAATTCTATAACTCATGGATTGATGAAAAACGCAAGACTGTCAACATAATTACTGAGTTGTTCACCTCGGGCAGCCTCAGACAGTATCGTAAGAAACACAAGAAGGTTGACATGAAGGCTGTTAAAGGATGGGCAAGACAGGTTTTAATGGGTTTAAACTACCTTCACAGTCACAACCCACCTATTATACATAGGGATTTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTAATTGGAACCCCTGAGTTCATGGCACCTGAGCTGTACGATGAAAATTACAATGAATTGGCCGACATATATTCTTTTGGGATGTGCATGCTTGAGATGGTGACTTCTGAGTATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCGTCAGGTATAAAGCCTGCTTCTCTTTCTAAAGTCAAAGATCCAGAAATGAAATTGTTTATTGAGAAATGTCTAGTCCCAGCACCTCAAAGATTGTCAGCAAAGGAGCTTCTGAGGGATCCTTTTCTCCAAGTGAATGGTTCAGTAAGAAATCGTCCTCTCTCGTTACCAGATATTGTTCTTCCCAAAGTTGGAGCCTTTGGAGATCGTATTCTGATGTCAGAAGGTCCTGCTACTCAACGTAATGGATCCAGTTCTCTGGATCTTGATGAGTCCTGTGAGGTACCTGTGATCACTGTATTTGATCATGCTAGTAATGATGCTGTGCAATCTCATTGTGTTGAGATACGAAGGTTGAAGAGAGGTGATATTTTTTTCCTGAAAGGCGAAGAAAACGATGAGAACTCTTTATCAATAGTTCTCCGGATAGCTAATCGAGGCGGGCGAGCAAGAAATATTCATTTCCTATTCTACCTTGCCAGTGATACAGCCATCTCAGTGTCAAGTGAAATGGTTGAGCAACTCGAACTTGCAGATCAGAATGTAATATTCATAGCCGAGTTAATAGATCTGTTATTGATAAATTTGATTCCCAGCTGGAAACCTTGCGTAGACATTGCTCATTTGGTTTCGCCAAATTGTGAAAGAACTATTGCTCCACTGAAAGACTCTGTGTTGGCAAAACAGAAACAAATCTCAGAAGAATCTAGCCAAAATGTGGCTGAAGATATAGGTCTCCCAGATTCGCTTGGAAAGTCAGCCGCAAAAGAAAACCATGATCTCTCTCACTTCAATGAGGTTTTATCTCATTCCAGCGTTGATCTTCAAAGCGCAAGCAAGACAGATGATTTATATTCTGAGATTTCATGTGCTTCTGCAACATCTGACGTTAACGATATGAAATTATCTTTAGTTTCATACTTGTCTGCTGAGTCAGGATTTGCTGACTTCAACTTACCCGGAGTGACAGGAAGGAATGAATCCTCATTTGCATCTGTAATGGGGACATCACCTGATTATTATGGGAGCAAGGCTTCAGACATGGGAAGCCATGATATGTGGAGCATCTCTACCCATCCTAGTAGCGTTTCCTCCTTGTCTGATCCAGAGGATGAGTTGAGAGTAGAGTTAGATTTGATTGAACACAAGTACCAGGAGGCAATTACAGAAATATCCCAAATGAGATCCCAGGCCATCATGGAGACTAGAAGGAGGCTGTCACAGAAGAAAATGCAATGA 1980 0.4146 MSMVGAESSEECTGLAEPPDPDILEIDPTCRYIRYKEVIGKGAFKTCYKAFDEVDGIEVAWNQVQIDEVLQSPGDLERLYSEVHLLKSLKNNNIVKFYNSWIDEKRKTVNIITELFTSGSLRQYRKKHKKVDMKAVKGWARQVLMGLNYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTSEYPYSECRNSAQIYKKVSSGIKPASLSKVKDPEMKLFIEKCLVPAPQRLSAKELLRDPFLQVNGSVRNRPLSLPDIVLPKVGAFGDRILMSEGPATQRNGSSSLDLDESCEVPVITVFDHASNDAVQSHCVEIRRLKRGDIFFLKGEENDENSLSIVLRIANRGGRARNIHFLFYLASDTAISVSSEMVEQLELADQNVIFIAELIDLLLINLIPSWKPCVDIAHLVSPNCERTIAPLKDSVLAKQKQISEESSQNVAEDIGLPDSLGKSAAKENHDLSHFNEVLSHSSVDLQSASKTDDLYSEISCASATSDVNDMKLSLVSYLSAESGFADFNLPGVTGRNESSFASVMGTSPDYYGSKASDMGSHDMWSISTHPSSVSSLSDPEDELRVELDLIEHKYQEAITEISQMRSQAIMETRRRLSQKKMQ 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0353 659 MobiDBLite consensus disorder prediction 1 20 - -
Dere03g0353 659 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0353 659 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0353 659 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 653 - -
Dere03g0353 659 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Dere03g0353 659 Coils Coil 617 659 - -
Dere03g0353 659 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0353 659 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Dere03g0353 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Dere03g0353 659 CDD STKc_WNK 31 290 - -
Dere03g0353 659 SUPERFAMILY Protein kinase-like (PK-like) 35 333 IPR011009 -
Dere03g0353 659 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Dere03g0353 659 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0353 Dere-ChrDere03 7202925 7206467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0353 133 488 MAP Kinase Kinase Kinase AT1G49160 67.416 8.00e-171 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dere03g0353 Pkinase 3.2e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0353 03 7202925 7206467 Dere03g0353 03 7202925 7206467 ECH