Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0337 ATGCGTAATGAACCTTCAATAATACTGTCCCTTCTTATGAAAGGGGCTTGTGCATTAGACGTGACTTTTGATGGTCACAGTGTTGTTAGTATCGGCAGAAGATTGACAAGACCGAAGGACTACCATGCGAAAACAGTGCAGGGCAAAGTGACAAACAACGGATATGCATCAATGCTCTTGAAAGAGGAATACAGAGAAGTGCAACGGCAGGATTTTCCTGTGTTCATGTCTTTCTTCATCAAAAGGTTCAAATGGGATATCGCCACCAGAAAGGGAAGCCTCACGGTGAGAAAGAAGCCGGCTTTTGACGATTGTTTAGAGACGATCGACAAGCTTCACACTACCGTGGAGGATCTAAAACTATTTCTGAATAAGAAGACCCTGTACCAGCGCGTTGACTATCTGAAGACTCTGCTCTACGCCGCCATAACTAACCTGGTCACCTGCCTCGACGGATTCTCACACAACGGTGCCGACAAGAAAGTAAGGGAAGCTCTAGAGGCAAGGCAAGTGCACGTGGAGCACAGGTGCAGCAATGCTCTGGCAATCATTAAAAAATGCGGTGAATTAGGAGAAGAAGAAGGGTATAACTAA 594 0.4579 MRNEPSIILSLLMKGACALDVTFDGHSVVSIGRRLTRPKDYHAKTVQGKVTNNGYASMLLKEEYREVQRQDFPVFMSFFIKRFKWDIATRKGSLTVRKKPAFDDCLETIDKLHTTVEDLKLFLNKKTLYQRVDYLKTLLYAAITNLVTCLDGFSHNGADKKVREALEARQVHVEHRCSNALAIIKKCGELGEEEGYN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0337 197 Pfam Plant invertase/pectin methylesterase inhibitor 94 183 IPR006501 GO:0004857
Dere03g0337 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 87 186 IPR035513 -
Dere03g0337 197 PANTHER REGULATORY PROTEIN NPR3 1 55 IPR044292 GO:0009862|GO:2000022|GO:2000031
Dere03g0337 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 187 IPR035513 -
Dere03g0337 197 CDD PMEI-like_3 89 186 - -
Dere03g0337 197 SMART PMEI_2 41 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0337 Dere-ChrDere03 7028023 7029822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0337 78 185 Carbohydrate Esterase AT3G14310 58.929 3.06e-31 117