Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0312 ATGAAACCCAAGCACGCCACTAGCTATCGCTGCTCTTTCTTCCTATATGTCGCACTCACCGTTCTTTTTCTCCAATCTGCACCTTCATCCTCTGCTTTTTCAGCTTTCAGAGACTCCACTCAGCAACTGATCAACTTCAAAGCTTCTCTCCCTGACCAATCTCTACTCCAAAACTGGCTTCCTAATCAGGACCCATGTTCTTTCACTAGGATTTCCTGCAAGGAAACCCAGGTTTTTTCCATAGACCTCAGCTTCATGTCCTTGAGCACAAATTTCAGTGTTGTCTCCACCTATCTTCTCACACTCGACCACCTGGAAGCACTTAACTTGAAAGCCACCAATCTTTCTGGTACCATTTCTGCGCTCCCGCCTAGGTTCAGGTGTGGTGCTTCATTGAGCAGCATAGATCTATCTCTGAACAATTTGTCTGGTTCTGTTTCGGGCGTATCCTATCTGGCCTCTTGTTCAAGTTTGAAATCTCTCAACCTTTCGAATAATCTTCTTGAGTTTTCTGGCAAAGATTCAACTGGTTTGAGGCTCAATCTTCAAGTCCTTGATATCTCTTCCAATAAGATTTCCGGTCCAAACGTTGCCCCTTGGATCTTATCTCTAGGTTGCGACAACATGCGTGTCTTGGCTCTCCGTGGAAACAAAATCACTGGAGAAATCAACTTGTCGAATTGCCAGAAATTGCAGCATTTAGACCTTTCCGCTAACAATTTCTCTGTAGCTATTCCTTCGTTGGGCGAATGTTCGGTGATGGAGTACCTTGACATCTCTGCCAACAAGTATTTCGGCGACATTGGCCTCGTTCTCTCTCCCTGCAAGCAGCTCCGCCACCTTAACATTTCAAGCAACCAGTTCACCGGACCGGTTCCGTCACTTCCTGTGGACTCTCTGCAGTTCCTTTATCTCGCTGGCAACTATTTCCAAGGTCAGATTCCAGCGCGACTCGCCGATTTGTGCTCCACTCTAGTCGAGCTCGATCTTTCCTCGAACTACCTCTCGGGTGCGGTTCCGAGCGGTTTGAGCGCGTGTTCTTCACTGGAATTGTTTGATATATCCAGCAACAAGTTTTCGGGTGAATTACCGATTGAAATTTTCATGGAGATGAGCAGCTTGAAGAAGCTCGTTCTTTCATTCAATGATTTTGTCGGTAATTTGCCGGAGACTCTATCCAAGCTCGTGAGCTTGGAATCGTTGGATTTGGGTTCCAATAACTTCTCTGGGTCGATACCTAAAGGGTTATGTCAAGATCCTAGGAATAATTGGAAAGAACTATACCTACAGAATAATCAGTTCACGGGTTCTATTCCACCCACACTCAGCAACTGTTCTCAGCTTGTTTCGTTGGATTTAAGTGTCAACTACCTGACGGGGACTATCCCTTCCAGCTTGGGGTCTCTTTCGAAGCTTCGTGATTTGATTATTTGGTTGAATCAGCTTCGAGGCGAAATACCACAAGAGCTCATGTCCATCAAGACACTTGAGAATTTGATATTGGACTTCAATGAGCTAACAGGAACCATTCCTTCTGGTTTAAGAAACTGCACCAACATGAATTGGATCTCCTTGTCTAATAACAGGCTGAGCGGAGAGATTCCTGCTTGGATTGGCCAGCTTTCCAATCTTGCAATACTGAAACTGAGTAACAACTCGTTCTCTGGGAGGATTCCGCCGGAGCTCGGTGATTGTCAGAGCTTGATATGGTTGGATCTAAATACAAACTTCCTCAATGGATCAATTCCGCCTGAATTGTTCAAGCAATCTGGCAAAATTGCGGTGAATTTTATAAGTGGGAAAACTTATGTGTATATCAAGAATGATGGCAGTAAGGAGTGCCATGGGGCTGGGAATTTATTGGAGTTTGCTGGGATCAGTCCGGAGCAGTTGAACAGAATTTCAACAAGGAACCCCTGCAACTTCACTAGAGTTTATAGAGGTAGTCTTCAACCTACATTTAAACATAATGGTTCTATGATTTTTTTGGATATTTCACACAATATGTTGTCGGGTAGTATACCGAAGGATATTGGGAGCATGTACTATTTATACATTTTGAATTTGGGTCACAACGAGATATCTGGAAATATCCCAGAAGAACTTGGAAGCGTGACAAATCTCAACATACTTGATCTCTCCTGGAATAAGCTTGAAGGGCAAATTCCACAAACCTTGACAGGCCTTTCCCTGCTCACTGAAATTGATCTGTCGAACAACCAGCTTGCAGGAGTGATTCCTGAATCTGGTCAATTTGAAACTTTTGCCCCATACAGATTTATGAATAATTCTGGTCTCTGTGGATATCCTCTTTCTCCATGTGGGGCAGACTCAGGATCAAGTGCAAATGCTCAGCATCAGAAGTCTCACAGGAGACAAGCATCTCTTGCCGGTACTGTGGCCATGGGATTGCTATTCTCCCTCTTCTGCATATTTGGTGTGATTATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAGGAAGCTGCTCTTGATGTCTACATGGACAACAATTCTTTTTCAGGTACGGCCAACAACGTGAGCTGGAAGCTTACAAGTACCCGTGAAGCACTTAGCATAAACCTTGCAACATTTGAGAAGCCCATCCGGAAGCTTACTTTTGCAGATCTTCTTGAAGCTACTAACGGCTTTCACAATGACAGTCTTATTGGTTCCGGTGGTTTCGGTGATGTGTACAAGGCTCAATTGAAGGATGGAAGTGTTGTGGCCATCAAGAAACTGATACATGTTAGTGGGCAGGGTGACAGGGAATTCACAGCTGAAATGGAAACAATAGGGAGAATCAAGCATCGGAACCTTGTTCCCCTTCTGGGATACTGCAAGGTTGGAGAAGAAAGACTTTTGGCTTATGAATACATGAAATACGGAAGTCTAGAGGATGTTTTGCATGACCCAAAGAAAGCTGGAGTCAAGCTGAACTGGGCAATAAGGAGGAAAATCGCCATTGGGGCTGCAAGGGGATTGGCTTTTCTTCACCATAATTGCCTCCCACACATCATTCATAGAGACATGAAGTCCAGTAATGTATTGCTTGATGAAAACTTGGAAGCCAGAGTCTCTGATTTTGGAATGGCTAGGCTGATGAGCGCTTTGGATACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCTGGCTATGTTCCTCCTGAATATTATCAAAGCTTTAGATGCTCTACTAAAGGTGATGTATATAGTTATGGCGTAGTTTTACTGGAGCTGCTAACGGGGAAGCGTCCAACAGATTCGGCTGATTTTGGTGATAATAATCTCGTCGGATGGGTTAAACAACATGCCAAACTGAAAATAAGTGATGTTTTTGATCCAGAGCTCATGAAAGAGGACCCTAGTCTTGAGATTGAGCTTTTACAGCACTTAAAGGTTGCTTGTGCTTGTTTGGATGATCGACCATGGAGGCGTCCCACCATGATTCAAGTCATGGCAATGTTCAAGGAAATCCAAGCCGGGTCCGGTATCGATTCCCAATCCACCGTAGCTACTGAAGATGGAGGTTTTAGTGCAGTTGAAATGGTAGAGATGAGCATAAAAGAAGCCCCTGAATTCGGCAAGCCGTAG 3597 0.444 MKPKHATSYRCSFFLYVALTVLFLQSAPSSSAFSAFRDSTQQLINFKASLPDQSLLQNWLPNQDPCSFTRISCKETQVFSIDLSFMSLSTNFSVVSTYLLTLDHLEALNLKATNLSGTISALPPRFRCGASLSSIDLSLNNLSGSVSGVSYLASCSSLKSLNLSNNLLEFSGKDSTGLRLNLQVLDISSNKISGPNVAPWILSLGCDNMRVLALRGNKITGEINLSNCQKLQHLDLSANNFSVAIPSLGECSVMEYLDISANKYFGDIGLVLSPCKQLRHLNISSNQFTGPVPSLPVDSLQFLYLAGNYFQGQIPARLADLCSTLVELDLSSNYLSGAVPSGLSACSSLELFDISSNKFSGELPIEIFMEMSSLKKLVLSFNDFVGNLPETLSKLVSLESLDLGSNNFSGSIPKGLCQDPRNNWKELYLQNNQFTGSIPPTLSNCSQLVSLDLSVNYLTGTIPSSLGSLSKLRDLIIWLNQLRGEIPQELMSIKTLENLILDFNELTGTIPSGLRNCTNMNWISLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCQSLIWLDLNTNFLNGSIPPELFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISPEQLNRISTRNPCNFTRVYRGSLQPTFKHNGSMIFLDISHNMLSGSIPKDIGSMYYLYILNLGHNEISGNIPEELGSVTNLNILDLSWNKLEGQIPQTLTGLSLLTEIDLSNNQLAGVIPESGQFETFAPYRFMNNSGLCGYPLSPCGADSGSSANAQHQKSHRRQASLAGTVAMGLLFSLFCIFGVIIIAIETRKRRKKKEAALDVYMDNNSFSGTANNVSWKLTSTREALSINLATFEKPIRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGRIKHRNLVPLLGYCKVGEERLLAYEYMKYGSLEDVLHDPKKAGVKLNWAIRRKIAIGAARGLAFLHHNCLPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSALDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPSLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTVATEDGGFSAVEMVEMSIKEAPEFGKP 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0312 1198 ProSiteProfiles Protein kinase domain profile. 885 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0312 1198 SUPERFAMILY RNI-like 299 585 - -
Dere03g0312 1198 FunFam Brassinosteroid LRR receptor kinase 961 1162 - -
Dere03g0312 1198 Pfam Leucine rich repeat N-terminal domain 40 73 IPR013210 -
Dere03g0312 1198 Pfam Leucine Rich Repeat 277 303 IPR001611 GO:0005515
Dere03g0312 1198 Pfam Protein kinase domain 885 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0312 1198 SUPERFAMILY Protein kinase-like (PK-like) 871 1162 IPR011009 -
Dere03g0312 1198 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 652 774 - -
Dere03g0312 1198 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 419 602 - -
Dere03g0312 1198 ProSitePatterns Protein kinases ATP-binding region signature. 891 914 IPR017441 GO:0005524
Dere03g0312 1198 Pfam Brassinosteroid receptor island domain 591 655 IPR045381 -
Dere03g0312 1198 SUPERFAMILY L domain-like 651 776 - -
Dere03g0312 1198 Pfam Leucine rich repeat 495 553 IPR001611 GO:0005515
Dere03g0312 1198 Pfam Leucine rich repeat 684 742 IPR001611 GO:0005515
Dere03g0312 1198 Gene3D Phosphorylase Kinase; domain 1 845 960 - -
Dere03g0312 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1007 1019 IPR008271 GO:0004672|GO:0006468
Dere03g0312 1198 Gene3D Transferase(Phosphotransferase) domain 1 961 1162 - -
Dere03g0312 1198 SUPERFAMILY L domain-like 62 315 - -
Dere03g0312 1198 SMART serkin_6 885 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g0312 1198 FunFam Calmodulin-binding receptor kinase CaMRLK 297 414 - -
Dere03g0312 1198 SMART LRR_typ_2 155 178 IPR003591 -
Dere03g0312 1198 SMART LRR_typ_2 729 752 IPR003591 -
Dere03g0312 1198 SMART LRR_typ_2 705 728 IPR003591 -
Dere03g0312 1198 SMART LRR_typ_2 395 419 IPR003591 -
Dere03g0312 1198 SMART LRR_typ_2 541 565 IPR003591 -
Dere03g0312 1198 CDD STKc_IRAK 891 1160 - -
Dere03g0312 1198 FunFam Serine/threonine-protein kinase BRI1-like 1 598 655 - -
Dere03g0312 1198 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 423 1158 - -
Dere03g0312 1198 FunFam serine/threonine-protein kinase BRI1-like 2 846 960 - -
Dere03g0312 1198 Gene3D Ribonuclease Inhibitor 43 774 IPR032675 -
Dere03g0312 1198 Gene3D - 596 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0312 Dere-ChrDere03 6742166 6745762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0312 25 1194 Receptor kinase-like Gene Family AT4G39400 70.543 0.0 1620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dere03g0312 Pkinase 7.2e-45 CL0016