Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0311 ATGTCAACGACGTCGTCTCAAGCTGTTGTGAACCAGAGCTTGTTTGATCAGGAGCAGGATCAGATGGGGTTGCTTCCATTCCCTGCAAACTTGGGCTTCAATATCCCTCCCATGGGTGCTTGCCATCAATTGTCATCTTTAAAAGCCTTAAGTGGCATGGTTGCTTCATCACTTGCAATATCTGAAGCAGCTTCTATTACTGCAACCCCTAATCTTACGGGAACCCTACTCCCTTCCACACCTCATCATAGGCCAACCAGAGAAGACATCACTCCTCTCCTTTCCTTGCATAGATCCAGTCTAAATCAATGGGCATGGGGAGAAATGAGCGACTGTATGAGGAGTAAGAGAAGTACTGGAGGAGATGATGAAGATCAACATCATCAACTAGGGATTTCTGCGATGAAGATGAAGAGGTCAATGAAGGGAAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAAACCATGAGCGATGTGGATGTCTTAGATGATGGCTACAAGTGGAGGAAGTACGGCCAGAAAGTCGTCAAGAACACCCATCACCCCAGGAGCTACTATCGTTGCACACAAGACAACTGTAGGGTAAAGAAACGAGTGGAGAGGCTAGCAGAGGATCCGAGGATGGTGATAACCACATATGAAGGGAGGCATGCACACTCTCCTTCAAATGATCTCGAAGAATCACAAACTCCATCTCAGCTTACCACTTTCTTGTGGTAG 723 0.4689 MSTTSSQAVVNQSLFDQEQDQMGLLPFPANLGFNIPPMGACHQLSSLKALSGMVASSLAISEAASITATPNLTGTLLPSTPHHRPTREDITPLLSLHRSSLNQWAWGEMSDCMRSKRSTGGDDEDQHHQLGISAMKMKRSMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTHHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEESQTPSQLTTFLW 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0311 240 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g0311 240 FunFam WRKY transcription factor 57 149 223 - -
Dere03g0311 240 SUPERFAMILY WRKY DNA-binding domain 155 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g0311 240 Gene3D WRKY domain 150 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g0311 240 MobiDBLite consensus disorder prediction 217 236 - -
Dere03g0311 240 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g0311 240 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g0311 240 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 118 224 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0311 Dere-ChrDere03 6729531 6731162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0311 132 240 WRKY Transcription Factor Family AT4G39410 72.807 9.95e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere03g0311 WRKY 1.6e-24 CL0274