Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0300 ATGGACTACTACTTCGAAAACCCTAGTCCTAACCCTAATTTTGCCGTAAACATGGGTCTATCTTCGTCGTCTGAGTTCATATTATCCGATTACCTCATGCTCGATTATGGCGTGGATCATCATCAGGATTTGTCGCAAAGCACAGAATCATCGGAGAAGGCAACCAGCGATGCCACTGGATTTAGTACTGGTGCAACATCAGACAGCTATAACATGCAAGTGCTTCTTAATTATCCCTATCTGGTTTTGAAATGCGAACATGGAGTTAAGCGAAACCAAGCAGACGTGAGCCAAAGGATCGCCTTTAGAACCAGATCAGAGCTTGATGTTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCTGTGAAGAGTAGTCCGAATCCAAGGAACTACTACAAGTGTTCGAGTGGAGGATGCAAAGTGAAGAAAAGGGTACAAAGGGACAAGGATGACTCGAGCTATGTGATAACAACCTACGAAGGCATGCACAACCACGAGAGCCCATGTGCAGCCTATTACACCCAAATGGTGCACTCTAGTAGTGCCTGGGCTAATTTGTATGCTTCTGGAAACTCATCGTCTTCCTAG 597 0.4472 MDYYFENPSPNPNFAVNMGLSSSSEFILSDYLMLDYGVDHHQDLSQSTESSEKATSDATGFSTGATSDSYNMQVLLNYPYLVLKCEHGVKRNQADVSQRIAFRTRSELDVMDDGYKWRKYGKKSVKSSPNPRNYYKCSSGGCKVKKRVQRDKDDSSYVITTYEGMHNHESPCAAYYTQMVHSSSAWANLYASGNSSSS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0300 198 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 177 IPR044810 GO:0003700
Dere03g0300 198 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g0300 198 FunFam WRKY transcription factor 57 97 171 - -
Dere03g0300 198 Pfam WRKY DNA -binding domain 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g0300 198 Gene3D WRKY domain 98 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g0300 198 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g0300 198 SUPERFAMILY WRKY DNA-binding domain 103 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0300 Dere-ChrDere03 6599625 6601374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0300 95 182 WRKY Transcription Factor Family AT5G64810 70.455 1.29e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere03g0300 WRKY 2.6e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0300 03 6599625 6601374 Dere03g0300 03 6599625 6601374 ECH