Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0245 ATGGCTTCTGCCGTGAAATCCTCCGAATCCGAGGACCACAAGCAGGTGGACCTTGAGAACAACCCCATATCCGACTGGTTGCTCAATGCTCCTGAGCCCCCCTCTGTTTGGCGTCAGTTATCAGATTCCGTCGCCAAAACCATTTCTCAGCGTCGCCAAAAGATATCCTCTCTCAGAGACCAGCAAGGACGCAAGCTTGTGCTTTCAATCTTCCAAGGGATTTTCCCTATTCTTCATTGGGGCCGTAACTATACTCTCACTAAATTTAGGAACGATTTACTTGCTGGTCTTACTATTGCTAGTCTCTGCATTCCCCAGAGCATTGGGTATGCGACCTTGGCACACCTGGATCCTCAATATGGCCTCTATACAAGTGTTGTGCCTCCACTTATCTATGCTGTAATGGGGAGTTCAAGAGAGATAGCAATAGGACCAGTGGCTGTGGTTTCTCTTCTTCTATCTTCTATGGTTCCGAAATTGATAGACCCTGCCTCTGATCCCCATGGTTACACAAAGCTTGTTTTGACTACCACGCTCTTTGCGGGTACTTTTCAGGCTGCTTTCGGCCTCTTCAGGCTGGGATTCCTTGTGGATTTTCTGTCGCATGCTGTTATAGTTGGGTTCGTGGCAGGAGCAGCTATTGTTATCGGTCTTCAACAGTTGAAGGGACTGTTGGGTATCACTCATTTTACCAACAGGACTGACATTATCTCTGTTCTTAAAGCTGTCTGGAAATCATTTCAATATCCTTGGAATCCCCGTAATTTCATCCTGGGCTTCTCGTTCTTGATCTTCATTCTATCAACGAGATTTTTGGCTAAAAGGAAGAAGAAACTGTTTTGGCTAGCTGCAGTCTCTCCTCTTGTATCAGTGATAGCGTCAACTCTAATTGTTTTTGCGACAAGAGCTGATAAAAATGGAGTTAATATTGTGAAACACGTTAAAGGAGGATTGAACCCAAGCTCCATCAATCAGCTAGACTTCCATAGCCCCCATATTGCAGAAGTCGCCAAAATTGGACTAGTTGTTGCCCTCGTTGCCCTCACTGAATCAGTTGCTGTTGGTCGATCTTTTGCATCTATGAAAGGATACCACCTTGACGGAAACAGGGAAATGCTGTCCATAGGCATCACCAACATCATCGGATCTTTCACCTCTTGCTATGCTGCAACGGGTTCATTCTCCCGTACGGCGGTGAACTTCGCGGCGGGCTGCGAAACGTTAGTGTCGAACATAGTGATGGGGGCAACGGTGCTGATGTCGCTGCAGTTTTGTACGAAGCTGTTGTATTACACTCCGACGTCGATCCTTTCTTCCATAATCCTCTCTGCTCTGCCTGGACTCATAGACATATCTGAAGCGCACAAGATATGGAAGCTGGATAAGCTCGACTTTCTTGCTTCCTTTGTAGCCTTCTTCGGTGTGCTTTTCGCCTCCGTTGAGATCGGTCTCCTCTTAGCGGTGGTAATATCGTTTTCGAAGATCATTGTAATCTCAGTCCGACCTGGCACAGAAACTCTGGGAAAGCTTCCTGGAACTGATATGTTCTGCGATGTGCATCAGTATCCTATGGCTGTGAAGACTCCTGGGACTCTAATCATCCGCGTCAAGTCTGCACTGCTTTGCTTTGCAAATGCCAATTTCGTTAGGGAAAGGATCATGAAATGGGTCGCACAGGAAGAATCAGAGGACCACAAGGGAAGTACCACAAGAACCATTCAGCTCGTGATCCTCGACATCTCCAATTTGGTGAACATCGATACCTCTGGAATTGCTTCTCTGGAAGAACTGCATAAGAGTCTGGTCGCACAAGGGAAGGAGTTAGTAATTGCCAGCCCAACGTGGCAAGTAATCCACAAGCTAAAGGCTGCCAACTTTATCAGCAAAATTCGTGGGAAGGTGTTCTTGACTGTAGGAGAAGCTGTTGGATGCAAGTCGGGGAGCTAA 1947 0.4684 MASAVKSSESEDHKQVDLENNPISDWLLNAPEPPSVWRQLSDSVAKTISQRRQKISSLRDQQGRKLVLSIFQGIFPILHWGRNYTLTKFRNDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSMVPKLIDPASDPHGYTKLVLTTTLFAGTFQAAFGLFRLGFLVDFLSHAVIVGFVAGAAIVIGLQQLKGLLGITHFTNRTDIISVLKAVWKSFQYPWNPRNFILGFSFLIFILSTRFLAKRKKKLFWLAAVSPLVSVIASTLIVFATRADKNGVNIVKHVKGGLNPSSINQLDFHSPHIAEVAKIGLVVALVALTESVAVGRSFASMKGYHLDGNREMLSIGITNIIGSFTSCYAATGSFSRTAVNFAAGCETLVSNIVMGATVLMSLQFCTKLLYYTPTSILSSIILSALPGLIDISEAHKIWKLDKLDFLASFVAFFGVLFASVEIGLLLAVVISFSKIIVISVRPGTETLGKLPGTDMFCDVHQYPMAVKTPGTLIIRVKSALLCFANANFVRERIMKWVAQEESEDHKGSTTRTIQLVILDISNLVNIDTSGIASLEELHKSLVAQGKELVIASPTWQVIHKLKAANFISKIRGKVFLTVGEAVGCKSGS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0245 648 ProSiteProfiles STAS domain profile. 541 645 IPR002645 -
Dere03g0245 648 Gene3D STAS domain 501 646 IPR036513 -
Dere03g0245 648 MobiDBLite consensus disorder prediction 1 20 - -
Dere03g0245 648 CDD STAS_SulP_like_sulfate_transporter 522 630 - -
Dere03g0245 648 Pfam STAS domain 522 641 IPR002645 -
Dere03g0245 648 FunFam Sulfate transporter 31 501 647 - -
Dere03g0245 648 NCBIfam sulfate permease 76 633 IPR001902 GO:0016020|GO:0055085
Dere03g0245 648 Pfam Sulfate permease family 89 470 IPR011547 GO:0016020
Dere03g0245 648 SUPERFAMILY SpoIIaa-like 526 642 IPR036513 -
Dere03g0245 648 PANTHER SULFATE TRANSPORTER 53 643 IPR001902 GO:0016020|GO:0055085
Dere03g0245 648 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0245 Dere-ChrDere03 6103634 6109208 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0245 4 642 Inorganic Solute Cotransporters AT5G10180 67.031 0.0 879
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0245 03 6103634 6109208 Dere03g0245 03 6103634 6109208 ECH