Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0242 ATGCGAGCAAAGAAGACCAACTATTACGAAGTACTGAGGCTTGGGTCGGAGAAGGTAGGCATAAGTGAGATAAGGAAGGCACACAGAAGAATGGCTCTTCGATATCATCCAGATGTTTGTCCTGAGCAAGACTCGACCAGACGATTCGTTGAGCTTCAAAAGGCTTACGAGACGCTCTCTGATCCTGTTTCAAGAAAACTGCACGATTATGAGCTGGGTTTGATCGATTCCATTGGGTCAGTGTCGCTGGGAATGGAGGTAAGTGTACCCCCAGGGTTCCCTAGACATGTGTGGGAAACCCAACTTTGCGGACTCAAAGAAAGAGAGATTAAAAATTCAGTACACCGAGAAGAGGAGAAGGAAGGGGAAGGTGGGAGGGGAGAAAGAAAAGGGTTGCCCCTTGAGGAAGTCGAAAGGTGGAAGAAGCGCCAACCTGTCATGGACGGTTGGGATGCATCTACGCTTGCTTAA 471 0.4862 MRAKKTNYYEVLRLGSEKVGISEIRKAHRRMALRYHPDVCPEQDSTRRFVELQKAYETLSDPVSRKLHDYELGLIDSIGSVSLGMEVSVPPGFPRHVWETQLCGLKEREIKNSVHREEEKEGEGGRGERKGLPLEEVERWKKRQPVMDGWDASTLA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0242 156 SMART dnaj_3 6 64 IPR001623 -
Dere03g0242 156 ProSiteProfiles dnaJ domain profile. 7 72 IPR001623 -
Dere03g0242 156 PRINTS DnaJ domain signature 44 64 IPR001623 -
Dere03g0242 156 PRINTS DnaJ domain signature 28 43 IPR001623 -
Dere03g0242 156 Pfam DnaJ domain 7 69 IPR001623 -
Dere03g0242 156 MobiDBLite consensus disorder prediction 113 138 - -
Dere03g0242 156 CDD DnaJ 7 61 IPR001623 -
Dere03g0242 156 Gene3D DnaJ domain 1 78 IPR036869 -
Dere03g0242 156 SUPERFAMILY Chaperone J-domain 2 74 IPR036869 -
Dere03g0242 156 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 4 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0242 Dere-ChrDere03 6088061 6090183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0242 2 69 C2H2 Transcription Factor Family AT1G74250 41.892 3.89e-08 49.7